Cluster: HRGMv2_3660_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3660_6 | HRGMv2_3660_6_28 | 27752 | 30898 | - | 2.A.6.3.6 |
| TC | HRGMv2_3660_6 | HRGMv2_3660_6_29 | 30901 | 31989 | - | 2.A.6.2.40 |
| pfam | HRGMv2_3660_6 | HRGMv2_3660_6_30 | 32334 | 35045 | - | SLH | SLH |
| CAZyme | HRGMv2_3660_6 | HRGMv2_3660_6_31 | 35346 | 36134 | - | GT26 |
| pfam | HRGMv2_3660_6 | HRGMv2_3660_6_32 | 36140 | 37192 | - | LytR_cpsA_psr |
| pfam | HRGMv2_3660_6 | HRGMv2_3660_6_33 | 37222 | 37788 | - | Cu_amine_oxidN1 | Cu_amine_oxidN1 |
| TC | HRGMv2_3660_6 | HRGMv2_3660_6_34 | 37878 | 38912 | - | 1.A.33.1.5 |
Gene ID: HRGMv2_3660_6_28
Type: TC
Location: 27752 - 30898 (-)
Type: TC
Location: 27752 - 30898 (-)
Gene ID: HRGMv2_3660_6_29
Type: TC
Location: 30901 - 31989 (-)
Type: TC
Location: 30901 - 31989 (-)
Gene ID: HRGMv2_3660_6_30
Type: pfam
Location: 32334 - 35045 (-)
Type: pfam
Location: 32334 - 35045 (-)
Gene ID: HRGMv2_3660_6_31
Type: CAZyme
Location: 35346 - 36134 (-)
Type: CAZyme
Location: 35346 - 36134 (-)
Gene ID: HRGMv2_3660_6_32
Type: pfam
Location: 36140 - 37192 (-)
Type: pfam
Location: 36140 - 37192 (-)
Gene ID: HRGMv2_3660_6_33
Type: pfam
Location: 37222 - 37788 (-)
Type: pfam
Location: 37222 - 37788 (-)
Gene ID: HRGMv2_3660_6_34
Type: TC
Location: 37878 - 38912 (-)
Type: TC
Location: 37878 - 38912 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.