Cluster: HRGMv2_3660_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3660_5 | HRGMv2_3660_5_97 | 100452 | 102626 | + | 9.A.8.1.6 |
| pfam | HRGMv2_3660_5 | HRGMv2_3660_5_98 | 102661 | 102825 | + | FeoB_associated |
| pfam | HRGMv2_3660_5 | HRGMv2_3660_5_99 | 102957 | 104546 | + | Resolvase | Recombinase | Zn_ribbon_recom |
| TC | HRGMv2_3660_5 | HRGMv2_3660_5_100 | 104619 | 105329 | + | 9.A.8.1.5 |
| pfam | HRGMv2_3660_5 | HRGMv2_3660_5_101 | 105402 | 106712 | - | Aminotran_3 |
| TF | HRGMv2_3660_5 | HRGMv2_3660_5_102 | 106746 | 107312 | - | HTH_3 |
| CAZyme | HRGMv2_3660_5 | HRGMv2_3660_5_103 | 107605 | 109191 | + | GH26 |
Gene ID: HRGMv2_3660_5_97
Type: TC
Location: 100452 - 102626 (+)
Type: TC
Location: 100452 - 102626 (+)
Gene ID: HRGMv2_3660_5_98
Type: pfam
Location: 102661 - 102825 (+)
Type: pfam
Location: 102661 - 102825 (+)
Gene ID: HRGMv2_3660_5_99
Type: pfam
Location: 102957 - 104546 (+)
Type: pfam
Location: 102957 - 104546 (+)
Gene ID: HRGMv2_3660_5_100
Type: TC
Location: 104619 - 105329 (+)
Type: TC
Location: 104619 - 105329 (+)
Gene ID: HRGMv2_3660_5_101
Type: pfam
Location: 105402 - 106712 (-)
Type: pfam
Location: 105402 - 106712 (-)
Gene ID: HRGMv2_3660_5_102
Type: TF
Location: 106746 - 107312 (-)
Type: TF
Location: 106746 - 107312 (-)
Gene ID: HRGMv2_3660_5_103
Type: CAZyme
Location: 107605 - 109191 (+)
Type: CAZyme
Location: 107605 - 109191 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.