Cluster: HRGMv2_3660_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3660
- CGC Family ID: CGCFAM_00207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3660_1 | HRGMv2_3660_1_129 | 154140 | 157394 | + | CBM54 |
| pfam | HRGMv2_3660_1 | HRGMv2_3660_1_130 | 157478 | 158170 | - | DUF4097 | DUF4097 |
| TF | HRGMv2_3660_1 | HRGMv2_3660_1_131 | 158325 | 159104 | + | MerR |
| TC | HRGMv2_3660_1 | HRGMv2_3660_1_132 | 159408 | 160292 | + | 3.A.1.24.1 |
| TC | HRGMv2_3660_1 | HRGMv2_3660_1_133 | 160368 | 161339 | + | 3.A.1.24.2 |
| TC | HRGMv2_3660_1 | HRGMv2_3660_1_134 | 161332 | 161991 | + | 3.A.1.24.5 |
Gene ID: HRGMv2_3660_1_129
Type: CAZyme
Location: 154140 - 157394 (+)
Type: CAZyme
Location: 154140 - 157394 (+)
Gene ID: HRGMv2_3660_1_130
Type: pfam
Location: 157478 - 158170 (-)
Type: pfam
Location: 157478 - 158170 (-)
Gene ID: HRGMv2_3660_1_131
Type: TF
Location: 158325 - 159104 (+)
Type: TF
Location: 158325 - 159104 (+)
Gene ID: HRGMv2_3660_1_132
Type: TC
Location: 159408 - 160292 (+)
Type: TC
Location: 159408 - 160292 (+)
Gene ID: HRGMv2_3660_1_133
Type: TC
Location: 160368 - 161339 (+)
Type: TC
Location: 160368 - 161339 (+)
Gene ID: HRGMv2_3660_1_134
Type: TC
Location: 161332 - 161991 (+)
Type: TC
Location: 161332 - 161991 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.