Cluster: HRGMv2_3658_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3658
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3658_4 | HRGMv2_3658_4_25 | 27284 | 28405 | + | 4.D.2.1.5 |
| pfam | HRGMv2_3658_4 | HRGMv2_3658_4_26 | 28459 | 30009 | - | Amidase_3 |
| pfam | HRGMv2_3658_4 | HRGMv2_3658_4_27 | 30365 | 31351 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_3658_4 | HRGMv2_3658_4_28 | 31370 | 33967 | + | GH78 |
| TF | HRGMv2_3658_4 | HRGMv2_3658_4_29 | 34171 | 35238 | - | LacI |
| sulfatase | HRGMv2_3658_4 | HRGMv2_3658_4_30 | 35341 | 36453 | - | S1_19 |
| TC | HRGMv2_3658_4 | HRGMv2_3658_4_31 | 36757 | 38523 | - | 1.A.11.2.7 |
| pfam | HRGMv2_3658_4 | HRGMv2_3658_4_32 | 38675 | 40768 | - | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| TC | HRGMv2_3658_4 | HRGMv2_3658_4_33 | 41067 | 43382 | + | 3.A.3.5.15 |
| pfam | HRGMv2_3658_4 | HRGMv2_3658_4_34 | 43528 | 43854 | - | CdAMP_rec |
| pfam | HRGMv2_3658_4 | HRGMv2_3658_4_35 | 43889 | 44377 | - | DUF1854 |
| TC | HRGMv2_3658_4 | HRGMv2_3658_4_36 | 44395 | 46653 | - | 3.A.1.106.3 |
Gene ID: HRGMv2_3658_4_25
Type: TC
Location: 27284 - 28405 (+)
Type: TC
Location: 27284 - 28405 (+)
Gene ID: HRGMv2_3658_4_26
Type: pfam
Location: 28459 - 30009 (-)
Type: pfam
Location: 28459 - 30009 (-)
Gene ID: HRGMv2_3658_4_27
Type: pfam
Location: 30365 - 31351 (+)
Type: pfam
Location: 30365 - 31351 (+)
Gene ID: HRGMv2_3658_4_28
Type: CAZyme
Location: 31370 - 33967 (+)
Type: CAZyme
Location: 31370 - 33967 (+)
Gene ID: HRGMv2_3658_4_29
Type: TF
Location: 34171 - 35238 (-)
Type: TF
Location: 34171 - 35238 (-)
Gene ID: HRGMv2_3658_4_30
Type: sulfatase
Location: 35341 - 36453 (-)
Type: sulfatase
Location: 35341 - 36453 (-)
Gene ID: HRGMv2_3658_4_31
Type: TC
Location: 36757 - 38523 (-)
Type: TC
Location: 36757 - 38523 (-)
Gene ID: HRGMv2_3658_4_32
Type: pfam
Location: 38675 - 40768 (-)
Type: pfam
Location: 38675 - 40768 (-)
Gene ID: HRGMv2_3658_4_33
Type: TC
Location: 41067 - 43382 (+)
Type: TC
Location: 41067 - 43382 (+)
Gene ID: HRGMv2_3658_4_34
Type: pfam
Location: 43528 - 43854 (-)
Type: pfam
Location: 43528 - 43854 (-)
Gene ID: HRGMv2_3658_4_35
Type: pfam
Location: 43889 - 44377 (-)
Type: pfam
Location: 43889 - 44377 (-)
Gene ID: HRGMv2_3658_4_36
Type: TC
Location: 44395 - 46653 (-)
Type: TC
Location: 44395 - 46653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1212
Family
UBA1255
Genus
UMGS1851
Species
UMGS1851 sp900555605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.