Cluster: HRGMv2_3658_CGC22
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3658
- CGC Family ID: CGCFAM_04096
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3658_21 | HRGMv2_3658_21_11 | 11171 | 12154 | + | 9.B.146.1.3 |
| TC | HRGMv2_3658_21 | HRGMv2_3658_21_12 | 12176 | 13297 | + | 2.A.103.1.3 |
| pfam | HRGMv2_3658_21 | HRGMv2_3658_21_13 | 13193 | 13696 | - | EPSP_synthase |
| pfam | HRGMv2_3658_21 | HRGMv2_3658_21_14 | 13778 | 15532 | - | MutS_V |
| CAZyme | HRGMv2_3658_21 | HRGMv2_3658_21_15 | 15820 | 17796 | + | GH13_9 |
| pfam | HRGMv2_3658_21 | HRGMv2_3658_21_16 | 17956 | 19107 | + | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| pfam | HRGMv2_3658_21 | HRGMv2_3658_21_17 | 19144 | 20259 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_3658_21 | HRGMv2_3658_21_18 | 20438 | 21871 | + | GT5 |
| CAZyme | HRGMv2_3658_21 | HRGMv2_3658_21_19 | 21910 | 24324 | + | GT35 |
| CAZyme | HRGMv2_3658_21 | HRGMv2_3658_21_20 | 24373 | 26193 | + | GH13_39 |
| pfam | HRGMv2_3658_21 | HRGMv2_3658_21_21 | 26209 | 26667 | + | ATP-cone | Zn_ribbon_NrdR |
| peptidase | HRGMv2_3658_21 | HRGMv2_3658_21_22 | 26921 | 28474 | + | S16.UNW |
| TC | HRGMv2_3658_21 | HRGMv2_3658_21_23 | 28511 | 29617 | + | 3.A.11.1.3 |
| pfam | HRGMv2_3658_21 | HRGMv2_3658_21_24 | 29755 | 31947 | + | Topoisom_bac | Zn_ribbon_Top1 | Zn_ribbon_Top1 | Zn_ribbon_Top1 | Toprim |
| STP | HRGMv2_3658_21 | HRGMv2_3658_21_25 | 31948 | 33306 | + | Pyr_redox_2 |
| CAZyme | HRGMv2_3658_21 | HRGMv2_3658_21_26 | 33310 | 35877 | + | CBM67 | GH78 |
| TC | HRGMv2_3658_21 | HRGMv2_3658_21_27 | 35908 | 36267 | + | 9.B.55.2.1 |
Gene ID: HRGMv2_3658_21_11
Type: TC
Location: 11171 - 12154 (+)
Type: TC
Location: 11171 - 12154 (+)
Gene ID: HRGMv2_3658_21_12
Type: TC
Location: 12176 - 13297 (+)
Type: TC
Location: 12176 - 13297 (+)
Gene ID: HRGMv2_3658_21_13
Type: pfam
Location: 13193 - 13696 (-)
Type: pfam
Location: 13193 - 13696 (-)
Gene ID: HRGMv2_3658_21_14
Type: pfam
Location: 13778 - 15532 (-)
Type: pfam
Location: 13778 - 15532 (-)
Gene ID: HRGMv2_3658_21_15
Type: CAZyme
Location: 15820 - 17796 (+)
Type: CAZyme
Location: 15820 - 17796 (+)
Gene ID: HRGMv2_3658_21_16
Type: pfam
Location: 17956 - 19107 (+)
Type: pfam
Location: 17956 - 19107 (+)
Gene ID: HRGMv2_3658_21_17
Type: pfam
Location: 19144 - 20259 (+)
Type: pfam
Location: 19144 - 20259 (+)
Gene ID: HRGMv2_3658_21_18
Type: CAZyme
Location: 20438 - 21871 (+)
Type: CAZyme
Location: 20438 - 21871 (+)
Gene ID: HRGMv2_3658_21_19
Type: CAZyme
Location: 21910 - 24324 (+)
Type: CAZyme
Location: 21910 - 24324 (+)
Gene ID: HRGMv2_3658_21_20
Type: CAZyme
Location: 24373 - 26193 (+)
Type: CAZyme
Location: 24373 - 26193 (+)
Gene ID: HRGMv2_3658_21_21
Type: pfam
Location: 26209 - 26667 (+)
Type: pfam
Location: 26209 - 26667 (+)
Gene ID: HRGMv2_3658_21_22
Type: peptidase
Location: 26921 - 28474 (+)
Type: peptidase
Location: 26921 - 28474 (+)
Gene ID: HRGMv2_3658_21_23
Type: TC
Location: 28511 - 29617 (+)
Type: TC
Location: 28511 - 29617 (+)
Gene ID: HRGMv2_3658_21_24
Type: pfam
Location: 29755 - 31947 (+)
Type: pfam
Location: 29755 - 31947 (+)
Gene ID: HRGMv2_3658_21_25
Type: STP
Location: 31948 - 33306 (+)
Type: STP
Location: 31948 - 33306 (+)
Gene ID: HRGMv2_3658_21_26
Type: CAZyme
Location: 33310 - 35877 (+)
Type: CAZyme
Location: 33310 - 35877 (+)
Gene ID: HRGMv2_3658_21_27
Type: TC
Location: 35908 - 36267 (+)
Type: TC
Location: 35908 - 36267 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1212
Family
UBA1255
Genus
UMGS1851
Species
UMGS1851 sp900555605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.