dbCAN Logo

Cluster: HRGMv2_3658_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3658_15 HRGMv2_3658_15_37 43539 44477 - CE4
NULL(UNKNOWN) HRGMv2_3658_15 HRGMv2_3658_15_38 44813 46216 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3658_15 HRGMv2_3658_15_39 46833 47636 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_3658_15 HRGMv2_3658_15_40 47880 50630 - GH127
CAZyme HRGMv2_3658_15 HRGMv2_3658_15_41 50664 52520 - GH127
TC HRGMv2_3658_15 HRGMv2_3658_15_42 52775 54244 + 9.B.18.1.3
CAZyme HRGMv2_3658_15 HRGMv2_3658_15_43 54241 55446 + GT4
TC HRGMv2_3658_15 HRGMv2_3658_15_44 55412 56851 - 2.A.38.1.3
TC HRGMv2_3658_15 HRGMv2_3658_15_45 56922 58280 - 2.A.38.1.1
Gene ID: HRGMv2_3658_15_37
Type: CAZyme
Location: 43539 - 44477 (-)
Gene ID: HRGMv2_3658_15_38
Type:
Location: 44813 - 46216 (-)
Gene ID: HRGMv2_3658_15_39
Type: TF
Location: 46833 - 47636 (+)
Gene ID: HRGMv2_3658_15_40
Type: CAZyme
Location: 47880 - 50630 (-)
Gene ID: HRGMv2_3658_15_41
Type: CAZyme
Location: 50664 - 52520 (-)
Gene ID: HRGMv2_3658_15_42
Type: TC
Location: 52775 - 54244 (+)
Gene ID: HRGMv2_3658_15_43
Type: CAZyme
Location: 54241 - 55446 (+)
Gene ID: HRGMv2_3658_15_44
Type: TC
Location: 55412 - 56851 (-)
Gene ID: HRGMv2_3658_15_45
Type: TC
Location: 56922 - 58280 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1212
→
Family
UBA1255
→
Genus
UMGS1851
→
Species
UMGS1851 sp900555605

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List