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Cluster: HRGMv2_3657_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3657_20 HRGMv2_3657_20_43 45147 46637 - GH73
TC HRGMv2_3657_20 HRGMv2_3657_20_44 46640 47059 - 1.E.19.1.11
pfam HRGMv2_3657_20 HRGMv2_3657_20_45 47604 47813 - HTH_16
STP HRGMv2_3657_20 HRGMv2_3657_20_46 47803 48243 - Sigma70_r4_2
TC HRGMv2_3657_20 HRGMv2_3657_20_47 48469 49071 - 2.A.115.2.14
TC HRGMv2_3657_20 HRGMv2_3657_20_48 49085 50416 - 2.A.66.1.26
Gene ID: HRGMv2_3657_20_43
Type: CAZyme
Location: 45147 - 46637 (-)
Gene ID: HRGMv2_3657_20_44
Type: TC
Location: 46640 - 47059 (-)
Gene ID: HRGMv2_3657_20_45
Type: pfam
Location: 47604 - 47813 (-)
Gene ID: HRGMv2_3657_20_46
Type: STP
Location: 47803 - 48243 (-)
Gene ID: HRGMv2_3657_20_47
Type: TC
Location: 48469 - 49071 (-)
Gene ID: HRGMv2_3657_20_48
Type: TC
Location: 49085 - 50416 (-)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1212
Family
UBA1255

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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