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Cluster: HRGMv2_3657_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3657_10 HRGMv2_3657_10_9 6727 8259 + 4.C.1.1.6
pfam HRGMv2_3657_10 HRGMv2_3657_10_10 8263 8487 + PP-binding
TC HRGMv2_3657_10 HRGMv2_3657_10_11 8493 10046 + 2.A.50.2.1
NULL(UNKNOWN) HRGMv2_3657_10 HRGMv2_3657_10_12 10058 11572 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_3657_10 HRGMv2_3657_10_13 11597 13471 + S11.004
CAZyme HRGMv2_3657_10 HRGMv2_3657_10_14 13458 15614 - GH94
CAZyme HRGMv2_3657_10 HRGMv2_3657_10_15 15632 21241 - GT84
pfam HRGMv2_3657_10 HRGMv2_3657_10_16 21314 21826 + QueT
CAZyme HRGMv2_3657_10 HRGMv2_3657_10_17 21834 22616 - CE4
Gene ID: HRGMv2_3657_10_9
Type: TC
Location: 6727 - 8259 (+)
Gene ID: HRGMv2_3657_10_10
Type: pfam
Location: 8263 - 8487 (+)
Gene ID: HRGMv2_3657_10_11
Type: TC
Location: 8493 - 10046 (+)
Gene ID: HRGMv2_3657_10_12
Type:
Location: 10058 - 11572 (+)
Gene ID: HRGMv2_3657_10_13
Type: peptidase
Location: 11597 - 13471 (+)
Gene ID: HRGMv2_3657_10_14
Type: CAZyme
Location: 13458 - 15614 (-)
Gene ID: HRGMv2_3657_10_15
Type: CAZyme
Location: 15632 - 21241 (-)
Gene ID: HRGMv2_3657_10_16
Type: pfam
Location: 21314 - 21826 (+)
Gene ID: HRGMv2_3657_10_17
Type: CAZyme
Location: 21834 - 22616 (-)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1212
Family
UBA1255

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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