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Cluster: HRGMv2_3657_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3657_7 HRGMv2_3657_7_9 7643 8623 + 2.A.69.4.3
CAZyme HRGMv2_3657_7 HRGMv2_3657_7_10 8647 11730 + GH106
pfam HRGMv2_3657_7 HRGMv2_3657_7_11 12007 14700 + YfhO
TC HRGMv2_3657_7 HRGMv2_3657_7_12 14700 15407 + 3.A.25.2.1
NULL(UNKNOWN) HRGMv2_3657_7 HRGMv2_3657_7_13 15502 18468 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3657_7 HRGMv2_3657_7_14 18500 19528 + CE2
Gene ID: HRGMv2_3657_7_9
Type: TC
Location: 7643 - 8623 (+)
Gene ID: HRGMv2_3657_7_10
Type: CAZyme
Location: 8647 - 11730 (+)
Gene ID: HRGMv2_3657_7_11
Type: pfam
Location: 12007 - 14700 (+)
Gene ID: HRGMv2_3657_7_12
Type: TC
Location: 14700 - 15407 (+)
Gene ID: HRGMv2_3657_7_13
Type:
Location: 15502 - 18468 (+)
Gene ID: HRGMv2_3657_7_14
Type: CAZyme
Location: 18500 - 19528 (+)

Taxonomic Lineage

Domain
Bacteria
Order
UBA1212
Family
UBA1255

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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