Cluster: HRGMv2_3655_CGC4
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3655
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_115 | 133111 | 133791 | - | 3.A.1.122.2 |
| NULL(UNKNOWN) | HRGMv2_3655_4 | HRGMv2_3655_4_116 | 133788 | 134987 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3655_4 | HRGMv2_3655_4_117 | 135008 | 136087 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_118 | 136904 | 137950 | - | 2.A.21.9.2 |
| TF | HRGMv2_3655_4 | HRGMv2_3655_4_119 | 137957 | 138631 | - | Trans_reg_C |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_120 | 138840 | 141503 | - | FtsX | FtsX |
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_121 | 141505 | 142209 | - | 3.A.1.122.14 |
| NULL(UNKNOWN) | HRGMv2_3655_4 | HRGMv2_3655_4_122 | 142992 | 145625 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3655_4 | HRGMv2_3655_4_123 | 145682 | 146818 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3655_4 | HRGMv2_3655_4_124 | 146974 | 149076 | - | GH78 |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_125 | 149087 | 150094 | - | tRNA-synt_1b |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_126 | 150137 | 151432 | - | Met_gamma_lyase |
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_127 | 151433 | 152428 | - | 3.A.1.2.12 |
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_128 | 152425 | 153567 | - | 3.A.1.2.10 |
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_129 | 153560 | 155146 | - | 3.A.1.2.12 |
Gene ID: HRGMv2_3655_4_115
Type: TC
Location: 133111 - 133791 (-)
Type: TC
Location: 133111 - 133791 (-)
Gene ID: HRGMv2_3655_4_116
Type:
Location: 133788 - 134987 (-)
Type:
Location: 133788 - 134987 (-)
Gene ID: HRGMv2_3655_4_117
Type:
Location: 135008 - 136087 (-)
Type:
Location: 135008 - 136087 (-)
Gene ID: HRGMv2_3655_4_118
Type: TC
Location: 136904 - 137950 (-)
Type: TC
Location: 136904 - 137950 (-)
Gene ID: HRGMv2_3655_4_119
Type: TF
Location: 137957 - 138631 (-)
Type: TF
Location: 137957 - 138631 (-)
Gene ID: HRGMv2_3655_4_120
Type: pfam
Location: 138840 - 141503 (-)
Type: pfam
Location: 138840 - 141503 (-)
Gene ID: HRGMv2_3655_4_121
Type: TC
Location: 141505 - 142209 (-)
Type: TC
Location: 141505 - 142209 (-)
Gene ID: HRGMv2_3655_4_122
Type:
Location: 142992 - 145625 (+)
Type:
Location: 142992 - 145625 (+)
Gene ID: HRGMv2_3655_4_123
Type:
Location: 145682 - 146818 (+)
Type:
Location: 145682 - 146818 (+)
Gene ID: HRGMv2_3655_4_124
Type: CAZyme
Location: 146974 - 149076 (-)
Type: CAZyme
Location: 146974 - 149076 (-)
Gene ID: HRGMv2_3655_4_125
Type: pfam
Location: 149087 - 150094 (-)
Type: pfam
Location: 149087 - 150094 (-)
Gene ID: HRGMv2_3655_4_126
Type: pfam
Location: 150137 - 151432 (-)
Type: pfam
Location: 150137 - 151432 (-)
Gene ID: HRGMv2_3655_4_127
Type: TC
Location: 151433 - 152428 (-)
Type: TC
Location: 151433 - 152428 (-)
Gene ID: HRGMv2_3655_4_128
Type: TC
Location: 152425 - 153567 (-)
Type: TC
Location: 152425 - 153567 (-)
Gene ID: HRGMv2_3655_4_129
Type: TC
Location: 153560 - 155146 (-)
Type: TC
Location: 153560 - 155146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1212
Family
UBA1255
Genus
Egerieisoma
Species
Egerieisoma sp900552695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.