Cluster: HRGMv2_3655_CGC3
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3655
- CGC Family ID: CGCFAM_04096
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_35 | 43827 | 44978 | - | 3.B.1.1.2 |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_36 | 44992 | 45318 | - | OAD_gamma |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_37 | 45544 | 47028 | + | DUF1846 | DUF1846_C |
| CAZyme | HRGMv2_3655_4 | HRGMv2_3655_4_38 | 47053 | 48030 | + | GT2 |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_39 | 47979 | 48863 | - | Amidase_3 |
| CAZyme | HRGMv2_3655_4 | HRGMv2_3655_4_40 | 48885 | 51413 | - | CBM67 | GH78 |
| STP | HRGMv2_3655_4 | HRGMv2_3655_4_41 | 51373 | 52773 | - | Pyr_redox_2 |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_42 | 52785 | 54899 | - | Topoisom_bac | Zn_ribbon_Top1 | Zn_ribbon_Top1 | Zn_ribbon_Top1 | Toprim |
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_43 | 54969 | 56078 | - | 3.A.11.1.3 |
| peptidase | HRGMv2_3655_4 | HRGMv2_3655_4_44 | 56079 | 57602 | - | S16.UNW |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_45 | 57687 | 58148 | - | ATP-cone | Zn_ribbon_NrdR |
| CAZyme | HRGMv2_3655_4 | HRGMv2_3655_4_46 | 58172 | 59923 | - | GH13_39 |
| CAZyme | HRGMv2_3655_4 | HRGMv2_3655_4_47 | 59927 | 62344 | - | GT35 |
| CAZyme | HRGMv2_3655_4 | HRGMv2_3655_4_48 | 62341 | 63789 | - | GT5 |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_49 | 63811 | 64926 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_50 | 64938 | 66083 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | HRGMv2_3655_4 | HRGMv2_3655_4_51 | 66113 | 68074 | - | GH13_9 |
| pfam | HRGMv2_3655_4 | HRGMv2_3655_4_52 | 68193 | 69950 | + | MutS_V |
| TC | HRGMv2_3655_4 | HRGMv2_3655_4_53 | 69959 | 70789 | + | 1.A.23.2.1 |
Gene ID: HRGMv2_3655_4_35
Type: TC
Location: 43827 - 44978 (-)
Type: TC
Location: 43827 - 44978 (-)
Gene ID: HRGMv2_3655_4_36
Type: pfam
Location: 44992 - 45318 (-)
Type: pfam
Location: 44992 - 45318 (-)
Gene ID: HRGMv2_3655_4_37
Type: pfam
Location: 45544 - 47028 (+)
Type: pfam
Location: 45544 - 47028 (+)
Gene ID: HRGMv2_3655_4_38
Type: CAZyme
Location: 47053 - 48030 (+)
Type: CAZyme
Location: 47053 - 48030 (+)
Gene ID: HRGMv2_3655_4_39
Type: pfam
Location: 47979 - 48863 (-)
Type: pfam
Location: 47979 - 48863 (-)
Gene ID: HRGMv2_3655_4_40
Type: CAZyme
Location: 48885 - 51413 (-)
Type: CAZyme
Location: 48885 - 51413 (-)
Gene ID: HRGMv2_3655_4_41
Type: STP
Location: 51373 - 52773 (-)
Type: STP
Location: 51373 - 52773 (-)
Gene ID: HRGMv2_3655_4_42
Type: pfam
Location: 52785 - 54899 (-)
Type: pfam
Location: 52785 - 54899 (-)
Gene ID: HRGMv2_3655_4_43
Type: TC
Location: 54969 - 56078 (-)
Type: TC
Location: 54969 - 56078 (-)
Gene ID: HRGMv2_3655_4_44
Type: peptidase
Location: 56079 - 57602 (-)
Type: peptidase
Location: 56079 - 57602 (-)
Gene ID: HRGMv2_3655_4_45
Type: pfam
Location: 57687 - 58148 (-)
Type: pfam
Location: 57687 - 58148 (-)
Gene ID: HRGMv2_3655_4_46
Type: CAZyme
Location: 58172 - 59923 (-)
Type: CAZyme
Location: 58172 - 59923 (-)
Gene ID: HRGMv2_3655_4_47
Type: CAZyme
Location: 59927 - 62344 (-)
Type: CAZyme
Location: 59927 - 62344 (-)
Gene ID: HRGMv2_3655_4_48
Type: CAZyme
Location: 62341 - 63789 (-)
Type: CAZyme
Location: 62341 - 63789 (-)
Gene ID: HRGMv2_3655_4_49
Type: pfam
Location: 63811 - 64926 (-)
Type: pfam
Location: 63811 - 64926 (-)
Gene ID: HRGMv2_3655_4_50
Type: pfam
Location: 64938 - 66083 (-)
Type: pfam
Location: 64938 - 66083 (-)
Gene ID: HRGMv2_3655_4_51
Type: CAZyme
Location: 66113 - 68074 (-)
Type: CAZyme
Location: 66113 - 68074 (-)
Gene ID: HRGMv2_3655_4_52
Type: pfam
Location: 68193 - 69950 (+)
Type: pfam
Location: 68193 - 69950 (+)
Gene ID: HRGMv2_3655_4_53
Type: TC
Location: 69959 - 70789 (+)
Type: TC
Location: 69959 - 70789 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1212
Family
UBA1255
Genus
Egerieisoma
Species
Egerieisoma sp900552695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.