Cluster: HRGMv2_3650_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3650
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3650_7 | HRGMv2_3650_7_104 | 100952 | 102346 | - | GH30_1 |
| TC | HRGMv2_3650_7 | HRGMv2_3650_7_105 | 102349 | 103377 | - | 3.A.1.1.11 |
| TC | HRGMv2_3650_7 | HRGMv2_3650_7_106 | 103408 | 104343 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_3650_7_104
Type: CAZyme
Location: 100952 - 102346 (-)
Type: CAZyme
Location: 100952 - 102346 (-)
Gene ID: HRGMv2_3650_7_105
Type: TC
Location: 102349 - 103377 (-)
Type: TC
Location: 102349 - 103377 (-)
Gene ID: HRGMv2_3650_7_106
Type: TC
Location: 103408 - 104343 (-)
Type: TC
Location: 103408 - 104343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.