Cluster: HRGMv2_3650_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3650
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3650_4 | HRGMv2_3650_4_20 | 20647 | 21093 | - | 4.A.2.1.4 |
| TF | HRGMv2_3650_4 | HRGMv2_3650_4_21 | 21182 | 22069 | - | HTH_AraC |
| CAZyme | HRGMv2_3650_4 | HRGMv2_3650_4_22 | 22213 | 24984 | + | GH3 |
Gene ID: HRGMv2_3650_4_20
Type: TC
Location: 20647 - 21093 (-)
Type: TC
Location: 20647 - 21093 (-)
Gene ID: HRGMv2_3650_4_21
Type: TF
Location: 21182 - 22069 (-)
Type: TF
Location: 21182 - 22069 (-)
Gene ID: HRGMv2_3650_4_22
Type: CAZyme
Location: 22213 - 24984 (+)
Type: CAZyme
Location: 22213 - 24984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.