Cluster: HRGMv2_3650_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3650
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3650_21 | HRGMv2_3650_21_19 | 17731 | 18375 | - | 1.A.16.5.1 |
| CAZyme | HRGMv2_3650_21 | HRGMv2_3650_21_20 | 18678 | 20696 | + | GH77 |
| CAZyme | HRGMv2_3650_21 | HRGMv2_3650_21_21 | 20724 | 24362 | + | GH13 |
Gene ID: HRGMv2_3650_21_19
Type: TC
Location: 17731 - 18375 (-)
Type: TC
Location: 17731 - 18375 (-)
Gene ID: HRGMv2_3650_21_20
Type: CAZyme
Location: 18678 - 20696 (+)
Type: CAZyme
Location: 18678 - 20696 (+)
Gene ID: HRGMv2_3650_21_21
Type: CAZyme
Location: 20724 - 24362 (+)
Type: CAZyme
Location: 20724 - 24362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.