Cluster: HRGMv2_3650_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3650
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3650_15 | HRGMv2_3650_15_61 | 65492 | 67054 | - | 2.A.16.2.2 |
| peptidase | HRGMv2_3650_15 | HRGMv2_3650_15_62 | 67368 | 68933 | - | S16.UNW |
| CAZyme | HRGMv2_3650_15 | HRGMv2_3650_15_63 | 68975 | 70222 | + | GT104 |
Gene ID: HRGMv2_3650_15_61
Type: TC
Location: 65492 - 67054 (-)
Type: TC
Location: 65492 - 67054 (-)
Gene ID: HRGMv2_3650_15_62
Type: peptidase
Location: 67368 - 68933 (-)
Type: peptidase
Location: 67368 - 68933 (-)
Gene ID: HRGMv2_3650_15_63
Type: CAZyme
Location: 68975 - 70222 (+)
Type: CAZyme
Location: 68975 - 70222 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.