Cluster: HRGMv2_3650_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3650
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3650_14 | HRGMv2_3650_14_35 | 28934 | 30871 | - | 4.C.1.1.14 |
| pfam | HRGMv2_3650_14 | HRGMv2_3650_14_36 | 31026 | 31670 | + | FtsJ |
| CAZyme | HRGMv2_3650_14 | HRGMv2_3650_14_37 | 31679 | 32677 | + | CBM50 |
Gene ID: HRGMv2_3650_14_35
Type: TC
Location: 28934 - 30871 (-)
Type: TC
Location: 28934 - 30871 (-)
Gene ID: HRGMv2_3650_14_36
Type: pfam
Location: 31026 - 31670 (+)
Type: pfam
Location: 31026 - 31670 (+)
Gene ID: HRGMv2_3650_14_37
Type: CAZyme
Location: 31679 - 32677 (+)
Type: CAZyme
Location: 31679 - 32677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.