Cluster: HRGMv2_3646_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3646
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3646_2 | HRGMv2_3646_2_247 | 268906 | 270468 | - | 2.A.16.2.2 |
| peptidase | HRGMv2_3646_2 | HRGMv2_3646_2_248 | 270785 | 272350 | - | S16.UNW |
| CAZyme | HRGMv2_3646_2 | HRGMv2_3646_2_249 | 272448 | 272987 | + | GT104 |
Gene ID: HRGMv2_3646_2_247
Type: TC
Location: 268906 - 270468 (-)
Type: TC
Location: 268906 - 270468 (-)
Gene ID: HRGMv2_3646_2_248
Type: peptidase
Location: 270785 - 272350 (-)
Type: peptidase
Location: 270785 - 272350 (-)
Gene ID: HRGMv2_3646_2_249
Type: CAZyme
Location: 272448 - 272987 (+)
Type: CAZyme
Location: 272448 - 272987 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.