Cluster: HRGMv2_3646_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3646
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3646_9 | HRGMv2_3646_9_2 | 1519 | 2163 | - | 1.A.16.5.1 |
| CAZyme | HRGMv2_3646_9 | HRGMv2_3646_9_3 | 2476 | 4494 | + | GH77 |
| CAZyme | HRGMv2_3646_9 | HRGMv2_3646_9_4 | 4522 | 8166 | + | GH13 |
Gene ID: HRGMv2_3646_9_2
Type: TC
Location: 1519 - 2163 (-)
Type: TC
Location: 1519 - 2163 (-)
Gene ID: HRGMv2_3646_9_3
Type: CAZyme
Location: 2476 - 4494 (+)
Type: CAZyme
Location: 2476 - 4494 (+)
Gene ID: HRGMv2_3646_9_4
Type: CAZyme
Location: 4522 - 8166 (+)
Type: CAZyme
Location: 4522 - 8166 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.