Cluster: HRGMv2_3646_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3646
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3646_5 | HRGMv2_3646_5_43 | 49668 | 50972 | - | 1.B.9.2.4 |
| pfam | HRGMv2_3646_5 | HRGMv2_3646_5_44 | 51096 | 51992 | - | EamA | EamA |
| CAZyme | HRGMv2_3646_5 | HRGMv2_3646_5_45 | 52158 | 54605 | - | GT35 |
| CAZyme | HRGMv2_3646_5 | HRGMv2_3646_5_46 | 54709 | 56847 | - | GH13_11 |
Gene ID: HRGMv2_3646_5_43
Type: TC
Location: 49668 - 50972 (-)
Type: TC
Location: 49668 - 50972 (-)
Gene ID: HRGMv2_3646_5_44
Type: pfam
Location: 51096 - 51992 (-)
Type: pfam
Location: 51096 - 51992 (-)
Gene ID: HRGMv2_3646_5_45
Type: CAZyme
Location: 52158 - 54605 (-)
Type: CAZyme
Location: 52158 - 54605 (-)
Gene ID: HRGMv2_3646_5_46
Type: CAZyme
Location: 54709 - 56847 (-)
Type: CAZyme
Location: 54709 - 56847 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.