Cluster: HRGMv2_3646_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3646
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3646_4 | HRGMv2_3646_4_35 | 41227 | 42525 | + | 2.A.66.1.33 |
| NULL(UNKNOWN) | HRGMv2_3646_4 | HRGMv2_3646_4_36 | 43120 | 43623 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3646_4 | HRGMv2_3646_4_37 | 43631 | 45244 | + | SPOR |
| CAZyme | HRGMv2_3646_4 | HRGMv2_3646_4_38 | 45395 | 47407 | + | CBM61 | GH53 |
Gene ID: HRGMv2_3646_4_35
Type: TC
Location: 41227 - 42525 (+)
Type: TC
Location: 41227 - 42525 (+)
Gene ID: HRGMv2_3646_4_36
Type:
Location: 43120 - 43623 (+)
Type:
Location: 43120 - 43623 (+)
Gene ID: HRGMv2_3646_4_37
Type: pfam
Location: 43631 - 45244 (+)
Type: pfam
Location: 43631 - 45244 (+)
Gene ID: HRGMv2_3646_4_38
Type: CAZyme
Location: 45395 - 47407 (+)
Type: CAZyme
Location: 45395 - 47407 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.