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Cluster: HRGMv2_3646_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3646_3 HRGMv2_3646_3_180 198996 199910 + 9.A.25.1.1
pfam HRGMv2_3646_3 HRGMv2_3646_3_181 200198 200605 + Y1_Tnp
TC HRGMv2_3646_3 HRGMv2_3646_3_182 201312 202766 + 9.B.174.1.1
pfam HRGMv2_3646_3 HRGMv2_3646_3_183 202763 203572 + Methyltrans_RNA
CAZyme HRGMv2_3646_3 HRGMv2_3646_3_184 203574 204314 + GT26
TC HRGMv2_3646_3 HRGMv2_3646_3_185 204342 205382 + 3.A.23.1.1
Gene ID: HRGMv2_3646_3_180
Type: TC
Location: 198996 - 199910 (+)
Gene ID: HRGMv2_3646_3_181
Type: pfam
Location: 200198 - 200605 (+)
Gene ID: HRGMv2_3646_3_182
Type: TC
Location: 201312 - 202766 (+)
Gene ID: HRGMv2_3646_3_183
Type: pfam
Location: 202763 - 203572 (+)
Gene ID: HRGMv2_3646_3_184
Type: CAZyme
Location: 203574 - 204314 (+)
Gene ID: HRGMv2_3646_3_185
Type: TC
Location: 204342 - 205382 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Treponematales
→
Family
Treponemataceae
→
Genus
Treponema_D
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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