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Cluster: HRGMv2_3625_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3625_1 HRGMv2_3625_1_163 163280 165211 + 4.A.1.2.12
CAZyme HRGMv2_3625_1 HRGMv2_3625_1_164 165211 166602 + GH32
pfam HRGMv2_3625_1 HRGMv2_3625_1_165 167487 168620 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3625_1 HRGMv2_3625_1_166 168622 169743 + Hexapep_GlmU
CAZyme HRGMv2_3625_1 HRGMv2_3625_1_167 169746 171176 + GT5
CAZyme HRGMv2_3625_1 HRGMv2_3625_1_168 171178 173424 + GT35
CAZyme HRGMv2_3625_1 HRGMv2_3625_1_169 173414 175309 + GH13_14
pfam HRGMv2_3625_1 HRGMv2_3625_1_170 175299 176990 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
STP HRGMv2_3625_1 HRGMv2_3625_1_171 177077 177580 + FHA
TC HRGMv2_3625_1 HRGMv2_3625_1_172 177573 178835 + 2.A.103.1.7
Gene ID: HRGMv2_3625_1_163
Type: TC
Location: 163280 - 165211 (+)
Gene ID: HRGMv2_3625_1_164
Type: CAZyme
Location: 165211 - 166602 (+)
Gene ID: HRGMv2_3625_1_165
Type: pfam
Location: 167487 - 168620 (+)
Gene ID: HRGMv2_3625_1_166
Type: pfam
Location: 168622 - 169743 (+)
Gene ID: HRGMv2_3625_1_167
Type: CAZyme
Location: 169746 - 171176 (+)
Gene ID: HRGMv2_3625_1_168
Type: CAZyme
Location: 171178 - 173424 (+)
Gene ID: HRGMv2_3625_1_169
Type: CAZyme
Location: 173414 - 175309 (+)
Gene ID: HRGMv2_3625_1_170
Type: pfam
Location: 175299 - 176990 (+)
Gene ID: HRGMv2_3625_1_171
Type: STP
Location: 177077 - 177580 (+)
Gene ID: HRGMv2_3625_1_172
Type: TC
Location: 177573 - 178835 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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