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Cluster: HRGMv2_3625_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3625_15 HRGMv2_3625_15_33 33149 34327 - 2.A.36.2.1
NULL(UNKNOWN) HRGMv2_3625_15 HRGMv2_3625_15_34 34523 35668 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3625_15 HRGMv2_3625_15_35 36329 36913 - RNase_H | Cauli_VI | RVT_3
CAZyme HRGMv2_3625_15 HRGMv2_3625_15_36 36910 38361 - GH13_5
pfam HRGMv2_3625_15 HRGMv2_3625_15_37 38370 39002 - DeoC
STP HRGMv2_3625_15 HRGMv2_3625_15_38 38989 40095 - SpoIIE
TC HRGMv2_3625_15 HRGMv2_3625_15_39 40302 41753 - 4.A.1.2.7
STP HRGMv2_3625_15 HRGMv2_3625_15_40 41753 42628 - SIS
CAZyme HRGMv2_3625_15 HRGMv2_3625_15_41 42609 43592 - GH170
Gene ID: HRGMv2_3625_15_33
Type: TC
Location: 33149 - 34327 (-)
Gene ID: HRGMv2_3625_15_34
Type:
Location: 34523 - 35668 (+)
Gene ID: HRGMv2_3625_15_35
Type: pfam
Location: 36329 - 36913 (-)
Gene ID: HRGMv2_3625_15_36
Type: CAZyme
Location: 36910 - 38361 (-)
Gene ID: HRGMv2_3625_15_37
Type: pfam
Location: 38370 - 39002 (-)
Gene ID: HRGMv2_3625_15_38
Type: STP
Location: 38989 - 40095 (-)
Gene ID: HRGMv2_3625_15_39
Type: TC
Location: 40302 - 41753 (-)
Gene ID: HRGMv2_3625_15_40
Type: STP
Location: 41753 - 42628 (-)
Gene ID: HRGMv2_3625_15_41
Type: CAZyme
Location: 42609 - 43592 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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