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Cluster: HRGMv2_3625_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3625_14 HRGMv2_3625_14_7 8944 10350 - 3.A.1.31.2
TC HRGMv2_3625_14 HRGMv2_3625_14_8 10344 11039 - 3.A.1.31.1
TC HRGMv2_3625_14 HRGMv2_3625_14_9 11040 11621 - 3.A.1.31.1
TC HRGMv2_3625_14 HRGMv2_3625_14_10 11637 13358 - 3.A.1.135.5
TC HRGMv2_3625_14 HRGMv2_3625_14_11 13358 15106 - 3.A.1.21.1
TC HRGMv2_3625_14 HRGMv2_3625_14_12 15368 15841 + 4.A.6.1.6
STP HRGMv2_3625_14 HRGMv2_3625_14_13 15987 17645 + Pyr_redox_2 | Rhodanese
CAZyme HRGMv2_3625_14 HRGMv2_3625_14_14 17655 18974 + GH33
TC HRGMv2_3625_14 HRGMv2_3625_14_15 19024 20346 - 9.A.40.1.1
TC HRGMv2_3625_14 HRGMv2_3625_14_16 20363 21055 - 3.A.2.2.2
TC HRGMv2_3625_14 HRGMv2_3625_14_17 21065 22432 - 3.A.2.2.2
TC HRGMv2_3625_14 HRGMv2_3625_14_18 22432 24189 - 3.A.2.2.2
TC HRGMv2_3625_14 HRGMv2_3625_14_19 24201 24512 - 3.A.2.2.2
pfam HRGMv2_3625_14 HRGMv2_3625_14_20 24505 25569 - vATP-synt_AC39
pfam HRGMv2_3625_14 HRGMv2_3625_14_21 25580 26131 - vATP-synt_E
TC HRGMv2_3625_14 HRGMv2_3625_14_22 26147 26617 - 3.A.2.2.2
TC HRGMv2_3625_14 HRGMv2_3625_14_23 26617 28551 - 3.A.2.2.2
NULL(UNKNOWN) HRGMv2_3625_14 HRGMv2_3625_14_24 28538 28861 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3625_14 HRGMv2_3625_14_25 29055 31361 - 9.B.74.1.4
Gene ID: HRGMv2_3625_14_7
Type: TC
Location: 8944 - 10350 (-)
Gene ID: HRGMv2_3625_14_8
Type: TC
Location: 10344 - 11039 (-)
Gene ID: HRGMv2_3625_14_9
Type: TC
Location: 11040 - 11621 (-)
Gene ID: HRGMv2_3625_14_10
Type: TC
Location: 11637 - 13358 (-)
Gene ID: HRGMv2_3625_14_11
Type: TC
Location: 13358 - 15106 (-)
Gene ID: HRGMv2_3625_14_12
Type: TC
Location: 15368 - 15841 (+)
Gene ID: HRGMv2_3625_14_13
Type: STP
Location: 15987 - 17645 (+)
Gene ID: HRGMv2_3625_14_14
Type: CAZyme
Location: 17655 - 18974 (+)
Gene ID: HRGMv2_3625_14_15
Type: TC
Location: 19024 - 20346 (-)
Gene ID: HRGMv2_3625_14_16
Type: TC
Location: 20363 - 21055 (-)
Gene ID: HRGMv2_3625_14_17
Type: TC
Location: 21065 - 22432 (-)
Gene ID: HRGMv2_3625_14_18
Type: TC
Location: 22432 - 24189 (-)
Gene ID: HRGMv2_3625_14_19
Type: TC
Location: 24201 - 24512 (-)
Gene ID: HRGMv2_3625_14_20
Type: pfam
Location: 24505 - 25569 (-)
Gene ID: HRGMv2_3625_14_21
Type: pfam
Location: 25580 - 26131 (-)
Gene ID: HRGMv2_3625_14_22
Type: TC
Location: 26147 - 26617 (-)
Gene ID: HRGMv2_3625_14_23
Type: TC
Location: 26617 - 28551 (-)
Gene ID: HRGMv2_3625_14_24
Type:
Location: 28538 - 28861 (-)
Gene ID: HRGMv2_3625_14_25
Type: TC
Location: 29055 - 31361 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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