Cluster: HRGMv2_3625_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_3625
- CGC Family ID: CGCFAM_00012
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3625_13 | HRGMv2_3625_13_26 | 30373 | 30702 | + | 4.A.3.2.2 |
| pfam | HRGMv2_3625_13 | HRGMv2_3625_13_27 | 30702 | 31016 | + | PTS_IIB |
| NULL(UNKNOWN) | HRGMv2_3625_13 | HRGMv2_3625_13_28 | 31016 | 31480 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3625_13 | HRGMv2_3625_13_29 | 31487 | 32965 | + | 4.A.3.2.8 |
| CAZyme | HRGMv2_3625_13 | HRGMv2_3625_13_30 | 32976 | 34397 | + | GH1 |
| CAZyme | HRGMv2_3625_13 | HRGMv2_3625_13_31 | 34467 | 35786 | + | GH4 |
Gene ID: HRGMv2_3625_13_26
Type: TC
Location: 30373 - 30702 (+)
Type: TC
Location: 30373 - 30702 (+)
Gene ID: HRGMv2_3625_13_27
Type: pfam
Location: 30702 - 31016 (+)
Type: pfam
Location: 30702 - 31016 (+)
Gene ID: HRGMv2_3625_13_28
Type:
Location: 31016 - 31480 (+)
Type:
Location: 31016 - 31480 (+)
Gene ID: HRGMv2_3625_13_29
Type: TC
Location: 31487 - 32965 (+)
Type: TC
Location: 31487 - 32965 (+)
Gene ID: HRGMv2_3625_13_30
Type: CAZyme
Location: 32976 - 34397 (+)
Type: CAZyme
Location: 32976 - 34397 (+)
Gene ID: HRGMv2_3625_13_31
Type: CAZyme
Location: 34467 - 35786 (+)
Type: CAZyme
Location: 34467 - 35786 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus urinomassiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.