dbCAN Logo

Cluster: HRGMv2_3625_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3625_13 HRGMv2_3625_13_12 10931 12622 + GH123
TF HRGMv2_3625_13 HRGMv2_3625_13_13 12619 14499 + HTH_11 | Mga
CAZyme HRGMv2_3625_13 HRGMv2_3625_13_14 14502 15812 + GH4
TC HRGMv2_3625_13 HRGMv2_3625_13_15 15812 16996 + 4.A.3.2.9
pfam HRGMv2_3625_13 HRGMv2_3625_13_16 17010 17342 + PTS_IIA
TC HRGMv2_3625_13 HRGMv2_3625_13_17 17339 17653 + 4.A.3.2.6
TC HRGMv2_3625_13 HRGMv2_3625_13_18 17667 18515 + 3.A.1.1.26
CAZyme HRGMv2_3625_13 HRGMv2_3625_13_19 18524 20644 + GH92
CAZyme HRGMv2_3625_13 HRGMv2_3625_13_20 20690 24187 + GH2
TC HRGMv2_3625_13 HRGMv2_3625_13_21 24347 25828 + 4.A.1.1.7
CAZyme HRGMv2_3625_13 HRGMv2_3625_13_22 25797 26969 + CE9
Gene ID: HRGMv2_3625_13_12
Type: CAZyme
Location: 10931 - 12622 (+)
Gene ID: HRGMv2_3625_13_13
Type: TF
Location: 12619 - 14499 (+)
Gene ID: HRGMv2_3625_13_14
Type: CAZyme
Location: 14502 - 15812 (+)
Gene ID: HRGMv2_3625_13_15
Type: TC
Location: 15812 - 16996 (+)
Gene ID: HRGMv2_3625_13_16
Type: pfam
Location: 17010 - 17342 (+)
Gene ID: HRGMv2_3625_13_17
Type: TC
Location: 17339 - 17653 (+)
Gene ID: HRGMv2_3625_13_18
Type: TC
Location: 17667 - 18515 (+)
Gene ID: HRGMv2_3625_13_19
Type: CAZyme
Location: 18524 - 20644 (+)
Gene ID: HRGMv2_3625_13_20
Type: CAZyme
Location: 20690 - 24187 (+)
Gene ID: HRGMv2_3625_13_21
Type: TC
Location: 24347 - 25828 (+)
Gene ID: HRGMv2_3625_13_22
Type: CAZyme
Location: 25797 - 26969 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List