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Cluster: HRGMv2_3625_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3625_11 HRGMv2_3625_11_14 14472 16331 + 3.A.1.135.7
TC HRGMv2_3625_11 HRGMv2_3625_11_15 16321 18090 + 3.A.1.106.14
pfam HRGMv2_3625_11 HRGMv2_3625_11_16 18151 19020 - BcrAD_BadFG
CAZyme HRGMv2_3625_11 HRGMv2_3625_11_17 19023 20354 - GH4
TC HRGMv2_3625_11 HRGMv2_3625_11_18 20369 21706 - 4.A.3.2.3
pfam HRGMv2_3625_11 HRGMv2_3625_11_19 21719 22030 - PTS_IIB
NULL(UNKNOWN) HRGMv2_3625_11 HRGMv2_3625_11_20 22047 22358 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3625_11 HRGMv2_3625_11_21 22348 22665 - 4.A.3.2.2
Gene ID: HRGMv2_3625_11_14
Type: TC
Location: 14472 - 16331 (+)
Gene ID: HRGMv2_3625_11_15
Type: TC
Location: 16321 - 18090 (+)
Gene ID: HRGMv2_3625_11_16
Type: pfam
Location: 18151 - 19020 (-)
Gene ID: HRGMv2_3625_11_17
Type: CAZyme
Location: 19023 - 20354 (-)
Gene ID: HRGMv2_3625_11_18
Type: TC
Location: 20369 - 21706 (-)
Gene ID: HRGMv2_3625_11_19
Type: pfam
Location: 21719 - 22030 (-)
Gene ID: HRGMv2_3625_11_20
Type:
Location: 22047 - 22358 (-)
Gene ID: HRGMv2_3625_11_21
Type: TC
Location: 22348 - 22665 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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