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Cluster: HRGMv2_3625_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3625_6 HRGMv2_3625_6_3 1695 2696 - GT4
CAZyme HRGMv2_3625_6 HRGMv2_3625_6_4 2665 3828 - GT4
NULL(UNKNOWN) HRGMv2_3625_6 HRGMv2_3625_6_5 3939 4289 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3625_6 HRGMv2_3625_6_6 4308 5900 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3625_6 HRGMv2_3625_6_7 5903 6604 - 3.A.1.124.1
pfam HRGMv2_3625_6 HRGMv2_3625_6_8 6705 7355 - Hydrolase | Hydrolase_like | HAD_2
pfam HRGMv2_3625_6 HRGMv2_3625_6_9 7513 8958 + NAPRTase | NAPRTase_N | NAPRTase_C
CAZyme HRGMv2_3625_6 HRGMv2_3625_6_10 8960 12361 + GH2
pfam HRGMv2_3625_6 HRGMv2_3625_6_11 12422 13282 - ROK
CAZyme HRGMv2_3625_6 HRGMv2_3625_6_12 13385 14707 - GH29
CAZyme HRGMv2_3625_6 HRGMv2_3625_6_13 14673 16055 - GH1
pfam HRGMv2_3625_6 HRGMv2_3625_6_14 16048 16944 - ROK
TF HRGMv2_3625_6 HRGMv2_3625_6_15 16985 17725 + HTH_6
CAZyme HRGMv2_3625_6 HRGMv2_3625_6_16 17715 18992 - GH125
CAZyme HRGMv2_3625_6 HRGMv2_3625_6_17 19003 21639 - GH38
CAZyme HRGMv2_3625_6 HRGMv2_3625_6_18 21641 22930 - GH84
STP HRGMv2_3625_6 HRGMv2_3625_6_19 23058 24659 - SBP_bac_1
pfam HRGMv2_3625_6 HRGMv2_3625_6_20 24713 26260 - SBP_bac_1 | DUF3502 | SBP_bac_8
TC HRGMv2_3625_6 HRGMv2_3625_6_21 26281 27201 - 3.A.1.1.29
TC HRGMv2_3625_6 HRGMv2_3625_6_22 27212 28225 - 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_3625_6 HRGMv2_3625_6_23 28235 28876 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3625_6 HRGMv2_3625_6_24 28876 29997 - 3.A.1.1.26
Gene ID: HRGMv2_3625_6_3
Type: CAZyme
Location: 1695 - 2696 (-)
Gene ID: HRGMv2_3625_6_4
Type: CAZyme
Location: 2665 - 3828 (-)
Gene ID: HRGMv2_3625_6_5
Type:
Location: 3939 - 4289 (+)
Gene ID: HRGMv2_3625_6_6
Type:
Location: 4308 - 5900 (-)
Gene ID: HRGMv2_3625_6_7
Type: TC
Location: 5903 - 6604 (-)
Gene ID: HRGMv2_3625_6_8
Type: pfam
Location: 6705 - 7355 (-)
Gene ID: HRGMv2_3625_6_9
Type: pfam
Location: 7513 - 8958 (+)
Gene ID: HRGMv2_3625_6_10
Type: CAZyme
Location: 8960 - 12361 (+)
Gene ID: HRGMv2_3625_6_11
Type: pfam
Location: 12422 - 13282 (-)
Gene ID: HRGMv2_3625_6_12
Type: CAZyme
Location: 13385 - 14707 (-)
Gene ID: HRGMv2_3625_6_13
Type: CAZyme
Location: 14673 - 16055 (-)
Gene ID: HRGMv2_3625_6_14
Type: pfam
Location: 16048 - 16944 (-)
Gene ID: HRGMv2_3625_6_15
Type: TF
Location: 16985 - 17725 (+)
Gene ID: HRGMv2_3625_6_16
Type: CAZyme
Location: 17715 - 18992 (-)
Gene ID: HRGMv2_3625_6_17
Type: CAZyme
Location: 19003 - 21639 (-)
Gene ID: HRGMv2_3625_6_18
Type: CAZyme
Location: 21641 - 22930 (-)
Gene ID: HRGMv2_3625_6_19
Type: STP
Location: 23058 - 24659 (-)
Gene ID: HRGMv2_3625_6_20
Type: pfam
Location: 24713 - 26260 (-)
Gene ID: HRGMv2_3625_6_21
Type: TC
Location: 26281 - 27201 (-)
Gene ID: HRGMv2_3625_6_22
Type: TC
Location: 27212 - 28225 (-)
Gene ID: HRGMv2_3625_6_23
Type:
Location: 28235 - 28876 (-)
Gene ID: HRGMv2_3625_6_24
Type: TC
Location: 28876 - 29997 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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