Cluster: HRGMv2_3621_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3621
- CGC Family ID: CGCFAM_04093
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3621_5 | HRGMv2_3621_5_39 | 44647 | 45132 | + | 4.A.6.1.21 |
| pfam | HRGMv2_3621_5 | HRGMv2_3621_5_40 | 45322 | 45672 | - | SdpI |
| CAZyme | HRGMv2_3621_5 | HRGMv2_3621_5_41 | 45775 | 46932 | + | GT4 |
| CAZyme | HRGMv2_3621_5 | HRGMv2_3621_5_42 | 46901 | 47914 | + | GT4 |
Gene ID: HRGMv2_3621_5_39
Type: TC
Location: 44647 - 45132 (+)
Type: TC
Location: 44647 - 45132 (+)
Gene ID: HRGMv2_3621_5_40
Type: pfam
Location: 45322 - 45672 (-)
Type: pfam
Location: 45322 - 45672 (-)
Gene ID: HRGMv2_3621_5_41
Type: CAZyme
Location: 45775 - 46932 (+)
Type: CAZyme
Location: 45775 - 46932 (+)
Gene ID: HRGMv2_3621_5_42
Type: CAZyme
Location: 46901 - 47914 (+)
Type: CAZyme
Location: 46901 - 47914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.