Cluster: HRGMv2_3621_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3621
- CGC Family ID: CGCFAM_02079
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3621_1 | HRGMv2_3621_1_118 | 126776 | 127327 | - | 2.A.51.1.6 |
| pfam | HRGMv2_3621_1 | HRGMv2_3621_1_119 | 127317 | 127883 | - | Chromate_transp |
| CAZyme | HRGMv2_3621_1 | HRGMv2_3621_1_120 | 127934 | 131215 | - | GH2 |
| CAZyme | HRGMv2_3621_1 | HRGMv2_3621_1_121 | 131205 | 133319 | - | GH92 |
| CAZyme | HRGMv2_3621_1 | HRGMv2_3621_1_122 | 133306 | 134937 | - | GH123 | GH123 |
Gene ID: HRGMv2_3621_1_118
Type: TC
Location: 126776 - 127327 (-)
Type: TC
Location: 126776 - 127327 (-)
Gene ID: HRGMv2_3621_1_119
Type: pfam
Location: 127317 - 127883 (-)
Type: pfam
Location: 127317 - 127883 (-)
Gene ID: HRGMv2_3621_1_120
Type: CAZyme
Location: 127934 - 131215 (-)
Type: CAZyme
Location: 127934 - 131215 (-)
Gene ID: HRGMv2_3621_1_121
Type: CAZyme
Location: 131205 - 133319 (-)
Type: CAZyme
Location: 131205 - 133319 (-)
Gene ID: HRGMv2_3621_1_122
Type: CAZyme
Location: 133306 - 134937 (-)
Type: CAZyme
Location: 133306 - 134937 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.