Cluster: HRGMv2_3621_CGC18
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3621
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3621_31 | HRGMv2_3621_31_1 | 93 | 1754 | - | GH13_29 |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_2 | 1763 | 3208 | - | 4.A.1.2.13 |
| NULL(UNKNOWN) | HRGMv2_3621_31 | HRGMv2_3621_31_3 | 3344 | 3730 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_4 | 3789 | 5033 | - | 2.A.120.1.1 |
| pfam | HRGMv2_3621_31 | HRGMv2_3621_31_5 | 5255 | 6229 | + | EamA | EamA |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_6 | 6293 | 7951 | - | 3.A.1.5.1 |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_7 | 7953 | 8936 | - | 3.A.1.5.20 |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_8 | 8926 | 9924 | - | 3.A.1.5.2 |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_9 | 9931 | 10956 | - | 3.A.1.5.2 |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_10 | 10958 | 11887 | - | 3.A.1.5.2 |
| pfam | HRGMv2_3621_31 | HRGMv2_3621_31_11 | 12278 | 14569 | - | Strep_his_triad | Strep_his_triad | Strep_his_triad | Strep_his_triad | Strep_his_triad | Strep_his_triad | Strep_his_triad | DUF5633 |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_12 | 14580 | 15374 | - | 3.A.1.15.11 |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_13 | 15381 | 16043 | - | 3.A.1.15.3 |
| TC | HRGMv2_3621_31 | HRGMv2_3621_31_14 | 16036 | 16977 | - | 3.A.1.15.3 |
Gene ID: HRGMv2_3621_31_1
Type: CAZyme
Location: 93 - 1754 (-)
Type: CAZyme
Location: 93 - 1754 (-)
Gene ID: HRGMv2_3621_31_2
Type: TC
Location: 1763 - 3208 (-)
Type: TC
Location: 1763 - 3208 (-)
Gene ID: HRGMv2_3621_31_3
Type:
Location: 3344 - 3730 (+)
Type:
Location: 3344 - 3730 (+)
Gene ID: HRGMv2_3621_31_4
Type: TC
Location: 3789 - 5033 (-)
Type: TC
Location: 3789 - 5033 (-)
Gene ID: HRGMv2_3621_31_5
Type: pfam
Location: 5255 - 6229 (+)
Type: pfam
Location: 5255 - 6229 (+)
Gene ID: HRGMv2_3621_31_6
Type: TC
Location: 6293 - 7951 (-)
Type: TC
Location: 6293 - 7951 (-)
Gene ID: HRGMv2_3621_31_7
Type: TC
Location: 7953 - 8936 (-)
Type: TC
Location: 7953 - 8936 (-)
Gene ID: HRGMv2_3621_31_8
Type: TC
Location: 8926 - 9924 (-)
Type: TC
Location: 8926 - 9924 (-)
Gene ID: HRGMv2_3621_31_9
Type: TC
Location: 9931 - 10956 (-)
Type: TC
Location: 9931 - 10956 (-)
Gene ID: HRGMv2_3621_31_10
Type: TC
Location: 10958 - 11887 (-)
Type: TC
Location: 10958 - 11887 (-)
Gene ID: HRGMv2_3621_31_11
Type: pfam
Location: 12278 - 14569 (-)
Type: pfam
Location: 12278 - 14569 (-)
Gene ID: HRGMv2_3621_31_12
Type: TC
Location: 14580 - 15374 (-)
Type: TC
Location: 14580 - 15374 (-)
Gene ID: HRGMv2_3621_31_13
Type: TC
Location: 15381 - 16043 (-)
Type: TC
Location: 15381 - 16043 (-)
Gene ID: HRGMv2_3621_31_14
Type: TC
Location: 16036 - 16977 (-)
Type: TC
Location: 16036 - 16977 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.