Cluster: HRGMv2_3621_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3621
- CGC Family ID: CGCFAM_10408
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3621_26 | HRGMv2_3621_26_6 | 5002 | 6330 | - | GH4 |
| TC | HRGMv2_3621_26 | HRGMv2_3621_26_7 | 6378 | 7967 | - | 4.A.1.1.8 |
| pfam | HRGMv2_3621_26 | HRGMv2_3621_26_8 | 8247 | 8747 | + | AhpC-TSA | Redoxin |
| TC | HRGMv2_3621_26 | HRGMv2_3621_26_9 | 8861 | 9682 | - | 2.A.66.1.33 |
| TC | HRGMv2_3621_26 | HRGMv2_3621_26_10 | 9679 | 10200 | - | 2.A.66.1.33 |
| pfam | HRGMv2_3621_26 | HRGMv2_3621_26_11 | 10331 | 10720 | + | bPH_1 |
| TC | HRGMv2_3621_26 | HRGMv2_3621_26_12 | 10785 | 12071 | - | 2.A.49.5.1 |
Gene ID: HRGMv2_3621_26_6
Type: CAZyme
Location: 5002 - 6330 (-)
Type: CAZyme
Location: 5002 - 6330 (-)
Gene ID: HRGMv2_3621_26_7
Type: TC
Location: 6378 - 7967 (-)
Type: TC
Location: 6378 - 7967 (-)
Gene ID: HRGMv2_3621_26_8
Type: pfam
Location: 8247 - 8747 (+)
Type: pfam
Location: 8247 - 8747 (+)
Gene ID: HRGMv2_3621_26_9
Type: TC
Location: 8861 - 9682 (-)
Type: TC
Location: 8861 - 9682 (-)
Gene ID: HRGMv2_3621_26_10
Type: TC
Location: 9679 - 10200 (-)
Type: TC
Location: 9679 - 10200 (-)
Gene ID: HRGMv2_3621_26_11
Type: pfam
Location: 10331 - 10720 (+)
Type: pfam
Location: 10331 - 10720 (+)
Gene ID: HRGMv2_3621_26_12
Type: TC
Location: 10785 - 12071 (-)
Type: TC
Location: 10785 - 12071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.