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Cluster: HRGMv2_3621_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3621_23 HRGMv2_3621_23_13 12369 13379 - 1.A.33.1.5
pfam HRGMv2_3621_23 HRGMv2_3621_23_14 13392 14078 - RadC | UPF0758_N
TC HRGMv2_3621_23 HRGMv2_3621_23_15 14056 14589 - 2.A.87.3.3
pfam HRGMv2_3621_23 HRGMv2_3621_23_16 14586 14978 - NusG_II
TC HRGMv2_3621_23 HRGMv2_3621_23_17 15069 15872 - 3.D.6.1.2
TC HRGMv2_3621_23 HRGMv2_3621_23_18 15882 16457 - 3.D.6.1.2
TC HRGMv2_3621_23 HRGMv2_3621_23_19 16471 17118 - 3.D.6.1.2
pfam HRGMv2_3621_23 HRGMv2_3621_23_20 17127 17672 - FMN_bind
TC HRGMv2_3621_23 HRGMv2_3621_23_21 17665 18642 - 3.D.6.1.2
TC HRGMv2_3621_23 HRGMv2_3621_23_22 18652 19971 - 3.D.6.1.2
CAZyme HRGMv2_3621_23 HRGMv2_3621_23_23 20039 20695 - GH23
Gene ID: HRGMv2_3621_23_13
Type: TC
Location: 12369 - 13379 (-)
Gene ID: HRGMv2_3621_23_14
Type: pfam
Location: 13392 - 14078 (-)
Gene ID: HRGMv2_3621_23_15
Type: TC
Location: 14056 - 14589 (-)
Gene ID: HRGMv2_3621_23_16
Type: pfam
Location: 14586 - 14978 (-)
Gene ID: HRGMv2_3621_23_17
Type: TC
Location: 15069 - 15872 (-)
Gene ID: HRGMv2_3621_23_18
Type: TC
Location: 15882 - 16457 (-)
Gene ID: HRGMv2_3621_23_19
Type: TC
Location: 16471 - 17118 (-)
Gene ID: HRGMv2_3621_23_20
Type: pfam
Location: 17127 - 17672 (-)
Gene ID: HRGMv2_3621_23_21
Type: TC
Location: 17665 - 18642 (-)
Gene ID: HRGMv2_3621_23_22
Type: TC
Location: 18652 - 19971 (-)
Gene ID: HRGMv2_3621_23_23
Type: CAZyme
Location: 20039 - 20695 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Tissierellales
→
Family
Peptoniphilaceae
→
Genus
Anaerococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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