Cluster: HRGMv2_3621_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3621
- CGC Family ID: CGCFAM_01052
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3621_19 | HRGMv2_3621_19_19 | 19574 | 20953 | + | GH33 |
| TC | HRGMv2_3621_19 | HRGMv2_3621_19_20 | 21117 | 22799 | + | 3.A.1.5.32 |
| TC | HRGMv2_3621_19 | HRGMv2_3621_19_21 | 22892 | 23860 | + | 3.A.1.5.20 |
| TC | HRGMv2_3621_19 | HRGMv2_3621_19_22 | 23869 | 24735 | + | 3.A.1.5.20 |
| TC | HRGMv2_3621_19 | HRGMv2_3621_19_23 | 24743 | 25762 | + | 3.A.1.5.29 |
| TC | HRGMv2_3621_19 | HRGMv2_3621_19_24 | 25746 | 26804 | + | 3.A.1.5.12 |
| CAZyme | HRGMv2_3621_19 | HRGMv2_3621_19_25 | 26797 | 28338 | + | CE7 |
Gene ID: HRGMv2_3621_19_19
Type: CAZyme
Location: 19574 - 20953 (+)
Type: CAZyme
Location: 19574 - 20953 (+)
Gene ID: HRGMv2_3621_19_20
Type: TC
Location: 21117 - 22799 (+)
Type: TC
Location: 21117 - 22799 (+)
Gene ID: HRGMv2_3621_19_21
Type: TC
Location: 22892 - 23860 (+)
Type: TC
Location: 22892 - 23860 (+)
Gene ID: HRGMv2_3621_19_22
Type: TC
Location: 23869 - 24735 (+)
Type: TC
Location: 23869 - 24735 (+)
Gene ID: HRGMv2_3621_19_23
Type: TC
Location: 24743 - 25762 (+)
Type: TC
Location: 24743 - 25762 (+)
Gene ID: HRGMv2_3621_19_24
Type: TC
Location: 25746 - 26804 (+)
Type: TC
Location: 25746 - 26804 (+)
Gene ID: HRGMv2_3621_19_25
Type: CAZyme
Location: 26797 - 28338 (+)
Type: CAZyme
Location: 26797 - 28338 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.