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Cluster: HRGMv2_3621_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3621_1 HRGMv2_3621_1_25 25408 26973 + 3.A.1.3.20
TC HRGMv2_3621_1 HRGMv2_3621_1_26 26966 27706 + 3.A.1.3.20
NULL(UNKNOWN) HRGMv2_3621_1 HRGMv2_3621_1_27 27859 28164 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3621_1 HRGMv2_3621_1_28 28291 29469 - 2.A.36.2.1
pfam HRGMv2_3621_1 HRGMv2_3621_1_29 29588 30172 - RNase_H | Cauli_VI | RVT_3
CAZyme HRGMv2_3621_1 HRGMv2_3621_1_30 30169 31620 - GH13_5
pfam HRGMv2_3621_1 HRGMv2_3621_1_31 31623 32261 - DeoC
STP HRGMv2_3621_1 HRGMv2_3621_1_32 32261 33352 - SpoIIE
TC HRGMv2_3621_1 HRGMv2_3621_1_33 33480 34919 - 4.A.1.2.7
STP HRGMv2_3621_1 HRGMv2_3621_1_34 34921 35802 - SIS
CAZyme HRGMv2_3621_1 HRGMv2_3621_1_35 35777 36766 - GH170
Gene ID: HRGMv2_3621_1_25
Type: TC
Location: 25408 - 26973 (+)
Gene ID: HRGMv2_3621_1_26
Type: TC
Location: 26966 - 27706 (+)
Gene ID: HRGMv2_3621_1_27
Type:
Location: 27859 - 28164 (+)
Gene ID: HRGMv2_3621_1_28
Type: TC
Location: 28291 - 29469 (-)
Gene ID: HRGMv2_3621_1_29
Type: pfam
Location: 29588 - 30172 (-)
Gene ID: HRGMv2_3621_1_30
Type: CAZyme
Location: 30169 - 31620 (-)
Gene ID: HRGMv2_3621_1_31
Type: pfam
Location: 31623 - 32261 (-)
Gene ID: HRGMv2_3621_1_32
Type: STP
Location: 32261 - 33352 (-)
Gene ID: HRGMv2_3621_1_33
Type: TC
Location: 33480 - 34919 (-)
Gene ID: HRGMv2_3621_1_34
Type: STP
Location: 34921 - 35802 (-)
Gene ID: HRGMv2_3621_1_35
Type: CAZyme
Location: 35777 - 36766 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Tissierellales
→
Family
Peptoniphilaceae
→
Genus
Anaerococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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