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Cluster: HRGMv2_3619_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3619_5 HRGMv2_3619_5_78 104619 105620 + 4.A.6.1.15
TC HRGMv2_3619_5 HRGMv2_3619_5_79 105630 106439 + 4.A.6.1.15
TC HRGMv2_3619_5 HRGMv2_3619_5_80 106448 107377 + 4.A.6.1.6
pfam HRGMv2_3619_5 HRGMv2_3619_5_81 107377 107745 + DUF956
pfam HRGMv2_3619_5 HRGMv2_3619_5_82 108138 110198 + GTP_EFTU | EFG_C | MMR_HSR1 | EFG_IV | EFG_III | EF-G_D2
CAZyme HRGMv2_3619_5 HRGMv2_3619_5_83 110234 112225 + GH13_8
pfam HRGMv2_3619_5 HRGMv2_3619_5_84 112225 112743 + Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_3619_5 HRGMv2_3619_5_85 112736 113602 + 1.A.23.3.1
Gene ID: HRGMv2_3619_5_78
Type: TC
Location: 104619 - 105620 (+)
Gene ID: HRGMv2_3619_5_79
Type: TC
Location: 105630 - 106439 (+)
Gene ID: HRGMv2_3619_5_80
Type: TC
Location: 106448 - 107377 (+)
Gene ID: HRGMv2_3619_5_81
Type: pfam
Location: 107377 - 107745 (+)
Gene ID: HRGMv2_3619_5_82
Type: pfam
Location: 108138 - 110198 (+)
Gene ID: HRGMv2_3619_5_83
Type: CAZyme
Location: 110234 - 112225 (+)
Gene ID: HRGMv2_3619_5_84
Type: pfam
Location: 112225 - 112743 (+)
Gene ID: HRGMv2_3619_5_85
Type: TC
Location: 112736 - 113602 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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