dbCAN Logo

Cluster: HRGMv2_3619_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3619_5 HRGMv2_3619_5_26 29731 31077 + 2.A.25.1.3
TC HRGMv2_3619_5 HRGMv2_3619_5_27 31084 31740 + 9.B.20.1.4
pfam HRGMv2_3619_5 HRGMv2_3619_5_28 32039 32758 + ABC_trans_CmpB
NULL(UNKNOWN) HRGMv2_3619_5 HRGMv2_3619_5_29 33193 35349 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3619_5 HRGMv2_3619_5_30 35358 36149 - 3.A.1.15.3
TC HRGMv2_3619_5 HRGMv2_3619_5_31 36142 36825 - 3.A.1.105.6
TC HRGMv2_3619_5 HRGMv2_3619_5_32 36818 37750 - 3.A.1.15.3
pfam HRGMv2_3619_5 HRGMv2_3619_5_33 38367 39302 - Homoserine_dh | NAD_binding_3
pfam HRGMv2_3619_5 HRGMv2_3619_5_34 39312 41075 - AA_kinase | HTS
CAZyme HRGMv2_3619_5 HRGMv2_3619_5_35 41444 42571 + CE9
Gene ID: HRGMv2_3619_5_26
Type: TC
Location: 29731 - 31077 (+)
Gene ID: HRGMv2_3619_5_27
Type: TC
Location: 31084 - 31740 (+)
Gene ID: HRGMv2_3619_5_28
Type: pfam
Location: 32039 - 32758 (+)
Gene ID: HRGMv2_3619_5_29
Type:
Location: 33193 - 35349 (-)
Gene ID: HRGMv2_3619_5_30
Type: TC
Location: 35358 - 36149 (-)
Gene ID: HRGMv2_3619_5_31
Type: TC
Location: 36142 - 36825 (-)
Gene ID: HRGMv2_3619_5_32
Type: TC
Location: 36818 - 37750 (-)
Gene ID: HRGMv2_3619_5_33
Type: pfam
Location: 38367 - 39302 (-)
Gene ID: HRGMv2_3619_5_34
Type: pfam
Location: 39312 - 41075 (-)
Gene ID: HRGMv2_3619_5_35
Type: CAZyme
Location: 41444 - 42571 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List