Cluster: HRGMv2_3619_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3619
- CGC Family ID: CGCFAM_10401
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3619_4 | HRGMv2_3619_4_41 | 34900 | 37155 | - | GH73 |
| NULL(UNKNOWN) | HRGMv2_3619_4 | HRGMv2_3619_4_42 | 37217 | 38272 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3619_4 | HRGMv2_3619_4_43 | 38428 | 39966 | - | HD |
| TC | HRGMv2_3619_4 | HRGMv2_3619_4_44 | 40051 | 41790 | - | 3.A.1.106.8 |
| TC | HRGMv2_3619_4 | HRGMv2_3619_4_45 | 41777 | 43516 | - | 3.A.1.106.8 |
Gene ID: HRGMv2_3619_4_41
Type: CAZyme
Location: 34900 - 37155 (-)
Type: CAZyme
Location: 34900 - 37155 (-)
Gene ID: HRGMv2_3619_4_42
Type:
Location: 37217 - 38272 (-)
Type:
Location: 37217 - 38272 (-)
Gene ID: HRGMv2_3619_4_43
Type: STP
Location: 38428 - 39966 (-)
Type: STP
Location: 38428 - 39966 (-)
Gene ID: HRGMv2_3619_4_44
Type: TC
Location: 40051 - 41790 (-)
Type: TC
Location: 40051 - 41790 (-)
Gene ID: HRGMv2_3619_4_45
Type: TC
Location: 41777 - 43516 (-)
Type: TC
Location: 41777 - 43516 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus hydrogenalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.