Cluster: HRGMv2_3619_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3619
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3619_13 | HRGMv2_3619_13_20 | 19508 | 20572 | - | GT2 |
| pfam | HRGMv2_3619_13 | HRGMv2_3619_13_21 | 20855 | 21445 | - | PAP2 |
| pfam | HRGMv2_3619_13 | HRGMv2_3619_13_22 | 21520 | 22770 | - | PGA_cap |
| TC | HRGMv2_3619_13 | HRGMv2_3619_13_23 | 22839 | 24155 | - | 2.A.22.5.2 |
| TC | HRGMv2_3619_13 | HRGMv2_3619_13_24 | 24174 | 25496 | - | 2.A.22.5.2 |
Gene ID: HRGMv2_3619_13_20
Type: CAZyme
Location: 19508 - 20572 (-)
Type: CAZyme
Location: 19508 - 20572 (-)
Gene ID: HRGMv2_3619_13_21
Type: pfam
Location: 20855 - 21445 (-)
Type: pfam
Location: 20855 - 21445 (-)
Gene ID: HRGMv2_3619_13_22
Type: pfam
Location: 21520 - 22770 (-)
Type: pfam
Location: 21520 - 22770 (-)
Gene ID: HRGMv2_3619_13_23
Type: TC
Location: 22839 - 24155 (-)
Type: TC
Location: 22839 - 24155 (-)
Gene ID: HRGMv2_3619_13_24
Type: TC
Location: 24174 - 25496 (-)
Type: TC
Location: 24174 - 25496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus hydrogenalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.