dbCAN Logo

Cluster: HRGMv2_3619_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3619_13 HRGMv2_3619_13_6 6374 7387 - 9.B.157.1.1
pfam HRGMv2_3619_13 HRGMv2_3619_13_7 7397 8077 - RadC | UPF0758_N
TC HRGMv2_3619_13 HRGMv2_3619_13_8 8070 8588 - 2.A.87.3.3
pfam HRGMv2_3619_13 HRGMv2_3619_13_9 8585 8968 - NusG_II
TC HRGMv2_3619_13 HRGMv2_3619_13_10 9058 9855 - 3.D.6.1.2
TC HRGMv2_3619_13 HRGMv2_3619_13_11 9868 10443 - 3.D.6.1.2
TC HRGMv2_3619_13 HRGMv2_3619_13_12 10453 11118 - 3.D.6.1.2
pfam HRGMv2_3619_13 HRGMv2_3619_13_13 11129 11668 - FMN_bind
TC HRGMv2_3619_13 HRGMv2_3619_13_14 11661 12599 - 3.D.6.1.2
TC HRGMv2_3619_13 HRGMv2_3619_13_15 12611 13927 - 3.D.6.1.2
CAZyme HRGMv2_3619_13 HRGMv2_3619_13_16 13992 14648 - GH23
Gene ID: HRGMv2_3619_13_6
Type: TC
Location: 6374 - 7387 (-)
Gene ID: HRGMv2_3619_13_7
Type: pfam
Location: 7397 - 8077 (-)
Gene ID: HRGMv2_3619_13_8
Type: TC
Location: 8070 - 8588 (-)
Gene ID: HRGMv2_3619_13_9
Type: pfam
Location: 8585 - 8968 (-)
Gene ID: HRGMv2_3619_13_10
Type: TC
Location: 9058 - 9855 (-)
Gene ID: HRGMv2_3619_13_11
Type: TC
Location: 9868 - 10443 (-)
Gene ID: HRGMv2_3619_13_12
Type: TC
Location: 10453 - 11118 (-)
Gene ID: HRGMv2_3619_13_13
Type: pfam
Location: 11129 - 11668 (-)
Gene ID: HRGMv2_3619_13_14
Type: TC
Location: 11661 - 12599 (-)
Gene ID: HRGMv2_3619_13_15
Type: TC
Location: 12611 - 13927 (-)
Gene ID: HRGMv2_3619_13_16
Type: CAZyme
Location: 13992 - 14648 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List