Cluster: HRGMv2_3619_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3619
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3619_12 | HRGMv2_3619_12_40 | 36220 | 37503 | - | 2.A.103.1.3 |
| STP | HRGMv2_3619_12 | HRGMv2_3619_12_41 | 37484 | 37987 | - | FHA |
| pfam | HRGMv2_3619_12 | HRGMv2_3619_12_42 | 38137 | 39828 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_3619_12 | HRGMv2_3619_12_43 | 39818 | 41704 | - | GH13_14 |
| CAZyme | HRGMv2_3619_12 | HRGMv2_3619_12_44 | 41710 | 43950 | - | GT35 |
| CAZyme | HRGMv2_3619_12 | HRGMv2_3619_12_45 | 43953 | 45383 | - | GT5 |
Gene ID: HRGMv2_3619_12_40
Type: TC
Location: 36220 - 37503 (-)
Type: TC
Location: 36220 - 37503 (-)
Gene ID: HRGMv2_3619_12_41
Type: STP
Location: 37484 - 37987 (-)
Type: STP
Location: 37484 - 37987 (-)
Gene ID: HRGMv2_3619_12_42
Type: pfam
Location: 38137 - 39828 (-)
Type: pfam
Location: 38137 - 39828 (-)
Gene ID: HRGMv2_3619_12_43
Type: CAZyme
Location: 39818 - 41704 (-)
Type: CAZyme
Location: 39818 - 41704 (-)
Gene ID: HRGMv2_3619_12_44
Type: CAZyme
Location: 41710 - 43950 (-)
Type: CAZyme
Location: 41710 - 43950 (-)
Gene ID: HRGMv2_3619_12_45
Type: CAZyme
Location: 43953 - 45383 (-)
Type: CAZyme
Location: 43953 - 45383 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus hydrogenalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.