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Cluster: HRGMv2_3619_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3619_2 HRGMv2_3619_2_13 13787 15145 + 3.A.1.1.45
TC HRGMv2_3619_2 HRGMv2_3619_2_14 15256 16101 + 3.A.1.1.45
TC HRGMv2_3619_2 HRGMv2_3619_2_15 16101 16937 + 3.A.1.1.45
TF HRGMv2_3619_2 HRGMv2_3619_2_16 16942 17973 + LacI
CAZyme HRGMv2_3619_2 HRGMv2_3619_2_17 17975 19435 + GH77
TC HRGMv2_3619_2 HRGMv2_3619_2_18 19495 20607 + 3.A.1.1.26
CAZyme HRGMv2_3619_2 HRGMv2_3619_2_19 20632 22926 + GT35
Gene ID: HRGMv2_3619_2_13
Type: TC
Location: 13787 - 15145 (+)
Gene ID: HRGMv2_3619_2_14
Type: TC
Location: 15256 - 16101 (+)
Gene ID: HRGMv2_3619_2_15
Type: TC
Location: 16101 - 16937 (+)
Gene ID: HRGMv2_3619_2_16
Type: TF
Location: 16942 - 17973 (+)
Gene ID: HRGMv2_3619_2_17
Type: CAZyme
Location: 17975 - 19435 (+)
Gene ID: HRGMv2_3619_2_18
Type: TC
Location: 19495 - 20607 (+)
Gene ID: HRGMv2_3619_2_19
Type: CAZyme
Location: 20632 - 22926 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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