Cluster: HRGMv2_3615_CGC7
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate: alpha-mannan
- Genome ID: HRGMv2_3615
- CGC Family ID: CGCFAM_02290
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3615_5 | HRGMv2_3615_5_56 | 54132 | 56243 | - | GH92 |
| CAZyme | HRGMv2_3615_5 | HRGMv2_3615_5_57 | 56258 | 57640 | - | GH1 |
| pfam | HRGMv2_3615_5 | HRGMv2_3615_5_58 | 57651 | 58529 | - | ROK |
| TF | HRGMv2_3615_5 | HRGMv2_3615_5_59 | 58574 | 59308 | + | HTH_6 |
| CAZyme | HRGMv2_3615_5 | HRGMv2_3615_5_60 | 59305 | 60582 | - | GH125 |
| CAZyme | HRGMv2_3615_5 | HRGMv2_3615_5_61 | 60598 | 63228 | - | GH38 |
| CAZyme | HRGMv2_3615_5 | HRGMv2_3615_5_62 | 63225 | 64526 | - | GH84 |
| pfam | HRGMv2_3615_5 | HRGMv2_3615_5_63 | 64648 | 66183 | - | DUF3502 | SBP_bac_8 |
| STP | HRGMv2_3615_5 | HRGMv2_3615_5_64 | 66256 | 67752 | - | SBP_bac_1 |
| TC | HRGMv2_3615_5 | HRGMv2_3615_5_65 | 67775 | 68701 | - | 3.A.1.1.29 |
| TC | HRGMv2_3615_5 | HRGMv2_3615_5_66 | 68710 | 69723 | - | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_3615_5 | HRGMv2_3615_5_67 | 69735 | 70376 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3615_5 | HRGMv2_3615_5_68 | 70376 | 71497 | - | 3.A.1.1.46 |
Gene ID: HRGMv2_3615_5_56
Type: CAZyme
Location: 54132 - 56243 (-)
Type: CAZyme
Location: 54132 - 56243 (-)
Gene ID: HRGMv2_3615_5_57
Type: CAZyme
Location: 56258 - 57640 (-)
Type: CAZyme
Location: 56258 - 57640 (-)
Gene ID: HRGMv2_3615_5_58
Type: pfam
Location: 57651 - 58529 (-)
Type: pfam
Location: 57651 - 58529 (-)
Gene ID: HRGMv2_3615_5_59
Type: TF
Location: 58574 - 59308 (+)
Type: TF
Location: 58574 - 59308 (+)
Gene ID: HRGMv2_3615_5_60
Type: CAZyme
Location: 59305 - 60582 (-)
Type: CAZyme
Location: 59305 - 60582 (-)
Gene ID: HRGMv2_3615_5_61
Type: CAZyme
Location: 60598 - 63228 (-)
Type: CAZyme
Location: 60598 - 63228 (-)
Gene ID: HRGMv2_3615_5_62
Type: CAZyme
Location: 63225 - 64526 (-)
Type: CAZyme
Location: 63225 - 64526 (-)
Gene ID: HRGMv2_3615_5_63
Type: pfam
Location: 64648 - 66183 (-)
Type: pfam
Location: 64648 - 66183 (-)
Gene ID: HRGMv2_3615_5_64
Type: STP
Location: 66256 - 67752 (-)
Type: STP
Location: 66256 - 67752 (-)
Gene ID: HRGMv2_3615_5_65
Type: TC
Location: 67775 - 68701 (-)
Type: TC
Location: 67775 - 68701 (-)
Gene ID: HRGMv2_3615_5_66
Type: TC
Location: 68710 - 69723 (-)
Type: TC
Location: 68710 - 69723 (-)
Gene ID: HRGMv2_3615_5_67
Type:
Location: 69735 - 70376 (-)
Type:
Location: 69735 - 70376 (-)
Gene ID: HRGMv2_3615_5_68
Type: TC
Location: 70376 - 71497 (-)
Type: TC
Location: 70376 - 71497 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus octavius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.