Cluster: HRGMv2_3615_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3615
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3615_5 | HRGMv2_3615_5_37 | 35032 | 35715 | - | 3.A.1.132.6 |
| TF | HRGMv2_3615_5 | HRGMv2_3615_5_38 | 35708 | 36073 | - | GntR |
| TC | HRGMv2_3615_5 | HRGMv2_3615_5_39 | 36233 | 36793 | - | 2.A.88.3.1 |
| pfam | HRGMv2_3615_5 | HRGMv2_3615_5_40 | 37268 | 38287 | - | Wzz |
| pfam | HRGMv2_3615_5 | HRGMv2_3615_5_41 | 38296 | 39414 | - | EpsG |
| CAZyme | HRGMv2_3615_5 | HRGMv2_3615_5_42 | 39540 | 42188 | - | CE1 |
Gene ID: HRGMv2_3615_5_37
Type: TC
Location: 35032 - 35715 (-)
Type: TC
Location: 35032 - 35715 (-)
Gene ID: HRGMv2_3615_5_38
Type: TF
Location: 35708 - 36073 (-)
Type: TF
Location: 35708 - 36073 (-)
Gene ID: HRGMv2_3615_5_39
Type: TC
Location: 36233 - 36793 (-)
Type: TC
Location: 36233 - 36793 (-)
Gene ID: HRGMv2_3615_5_40
Type: pfam
Location: 37268 - 38287 (-)
Type: pfam
Location: 37268 - 38287 (-)
Gene ID: HRGMv2_3615_5_41
Type: pfam
Location: 38296 - 39414 (-)
Type: pfam
Location: 38296 - 39414 (-)
Gene ID: HRGMv2_3615_5_42
Type: CAZyme
Location: 39540 - 42188 (-)
Type: CAZyme
Location: 39540 - 42188 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus octavius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.