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Cluster: HRGMv2_3615_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3615_5 HRGMv2_3615_5_2 524 1375 - 1.A.23.3.1
pfam HRGMv2_3615_5 HRGMv2_3615_5_3 1465 1947 - Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_3615_5 HRGMv2_3615_5_4 1944 3941 - GH13_8
pfam HRGMv2_3615_5 HRGMv2_3615_5_5 3959 6016 - GTP_EFTU | EFG_C | MMR_HSR1 | EFG_IV | EFG_III | EF-G_D2
pfam HRGMv2_3615_5 HRGMv2_3615_5_6 6198 6554 - DUF956
TC HRGMv2_3615_5 HRGMv2_3615_5_7 6554 7630 - 4.A.6.1.15
TC HRGMv2_3615_5 HRGMv2_3615_5_8 7642 8457 - 4.A.6.1.15
TC HRGMv2_3615_5 HRGMv2_3615_5_9 8466 9488 - 4.A.6.1.15
Gene ID: HRGMv2_3615_5_2
Type: TC
Location: 524 - 1375 (-)
Gene ID: HRGMv2_3615_5_3
Type: pfam
Location: 1465 - 1947 (-)
Gene ID: HRGMv2_3615_5_4
Type: CAZyme
Location: 1944 - 3941 (-)
Gene ID: HRGMv2_3615_5_5
Type: pfam
Location: 3959 - 6016 (-)
Gene ID: HRGMv2_3615_5_6
Type: pfam
Location: 6198 - 6554 (-)
Gene ID: HRGMv2_3615_5_7
Type: TC
Location: 6554 - 7630 (-)
Gene ID: HRGMv2_3615_5_8
Type: TC
Location: 7642 - 8457 (-)
Gene ID: HRGMv2_3615_5_9
Type: TC
Location: 8466 - 9488 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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