Cluster: HRGMv2_3615_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3615
- CGC Family ID: CGCFAM_09217
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3615_2 | HRGMv2_3615_2_58 | 56651 | 58132 | + | 3.A.1.2.20 |
| TC | HRGMv2_3615_2 | HRGMv2_3615_2_59 | 58129 | 59073 | + | 3.A.1.2.13 |
| TC | HRGMv2_3615_2 | HRGMv2_3615_2_60 | 59083 | 60027 | + | 3.A.1.2.13 |
| NULL(UNKNOWN) | HRGMv2_3615_2 | HRGMv2_3615_2_61 | 60099 | 60359 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3615_2 | HRGMv2_3615_2_62 | 60359 | 60838 | - | DHFR_1 |
| CAZyme | HRGMv2_3615_2 | HRGMv2_3615_2_63 | 60903 | 62030 | + | CE9 |
Gene ID: HRGMv2_3615_2_58
Type: TC
Location: 56651 - 58132 (+)
Type: TC
Location: 56651 - 58132 (+)
Gene ID: HRGMv2_3615_2_59
Type: TC
Location: 58129 - 59073 (+)
Type: TC
Location: 58129 - 59073 (+)
Gene ID: HRGMv2_3615_2_60
Type: TC
Location: 59083 - 60027 (+)
Type: TC
Location: 59083 - 60027 (+)
Gene ID: HRGMv2_3615_2_61
Type:
Location: 60099 - 60359 (-)
Type:
Location: 60099 - 60359 (-)
Gene ID: HRGMv2_3615_2_62
Type: pfam
Location: 60359 - 60838 (-)
Type: pfam
Location: 60359 - 60838 (-)
Gene ID: HRGMv2_3615_2_63
Type: CAZyme
Location: 60903 - 62030 (+)
Type: CAZyme
Location: 60903 - 62030 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus octavius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.