Cluster: HRGMv2_3615_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3615
- CGC Family ID: CGCFAM_10407
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3615_24 | HRGMv2_3615_24_11 | 9698 | 10372 | - | 3.A.1.132.12 |
| STP | HRGMv2_3615_24 | HRGMv2_3615_24_12 | 10484 | 11545 | - | Aminotran_1_2 |
| pfam | HRGMv2_3615_24 | HRGMv2_3615_24_13 | 11641 | 11865 | - | PC4 |
| CAZyme | HRGMv2_3615_24 | HRGMv2_3615_24_14 | 11883 | 12992 | - | GH25 |
| TC | HRGMv2_3615_24 | HRGMv2_3615_24_15 | 13226 | 14824 | + | 2.A.58.2.2 |
Gene ID: HRGMv2_3615_24_11
Type: TC
Location: 9698 - 10372 (-)
Type: TC
Location: 9698 - 10372 (-)
Gene ID: HRGMv2_3615_24_12
Type: STP
Location: 10484 - 11545 (-)
Type: STP
Location: 10484 - 11545 (-)
Gene ID: HRGMv2_3615_24_13
Type: pfam
Location: 11641 - 11865 (-)
Type: pfam
Location: 11641 - 11865 (-)
Gene ID: HRGMv2_3615_24_14
Type: CAZyme
Location: 11883 - 12992 (-)
Type: CAZyme
Location: 11883 - 12992 (-)
Gene ID: HRGMv2_3615_24_15
Type: TC
Location: 13226 - 14824 (+)
Type: TC
Location: 13226 - 14824 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus octavius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.