Cluster: HRGMv2_3615_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3615
- CGC Family ID: CGCFAM_04092
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3615_14 | HRGMv2_3615_14_36 | 44624 | 45892 | - | 2.A.40.1.1 |
| pfam | HRGMv2_3615_14 | HRGMv2_3615_14_37 | 46114 | 46536 | + | PTS_EIIA_2 |
| TC | HRGMv2_3615_14 | HRGMv2_3615_14_38 | 46538 | 46855 | + | 4.A.2.1.11 |
| TC | HRGMv2_3615_14 | HRGMv2_3615_14_39 | 46865 | 48094 | + | 4.A.2.1.11 |
| CAZyme | HRGMv2_3615_14 | HRGMv2_3615_14_40 | 48091 | 50652 | + | GH38 |
| TC | HRGMv2_3615_14 | HRGMv2_3615_14_41 | 50822 | 52048 | + | 2.A.23.1.5 |
Gene ID: HRGMv2_3615_14_36
Type: TC
Location: 44624 - 45892 (-)
Type: TC
Location: 44624 - 45892 (-)
Gene ID: HRGMv2_3615_14_37
Type: pfam
Location: 46114 - 46536 (+)
Type: pfam
Location: 46114 - 46536 (+)
Gene ID: HRGMv2_3615_14_38
Type: TC
Location: 46538 - 46855 (+)
Type: TC
Location: 46538 - 46855 (+)
Gene ID: HRGMv2_3615_14_39
Type: TC
Location: 46865 - 48094 (+)
Type: TC
Location: 46865 - 48094 (+)
Gene ID: HRGMv2_3615_14_40
Type: CAZyme
Location: 48091 - 50652 (+)
Type: CAZyme
Location: 48091 - 50652 (+)
Gene ID: HRGMv2_3615_14_41
Type: TC
Location: 50822 - 52048 (+)
Type: TC
Location: 50822 - 52048 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus octavius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.