dbCAN Logo

Cluster: HRGMv2_3615_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3615_10 HRGMv2_3615_10_19 16584 17240 + GH23
TC HRGMv2_3615_10 HRGMv2_3615_10_20 17306 18643 + 3.D.6.1.2
TC HRGMv2_3615_10 HRGMv2_3615_10_21 18654 19628 + 3.D.6.1.2
pfam HRGMv2_3615_10 HRGMv2_3615_10_22 19621 20160 + FMN_bind
TC HRGMv2_3615_10 HRGMv2_3615_10_23 20169 20840 + 3.D.6.1.2
TC HRGMv2_3615_10 HRGMv2_3615_10_24 20850 21422 + 3.D.6.1.2
TC HRGMv2_3615_10 HRGMv2_3615_10_25 21432 22232 + 3.D.6.1.2
pfam HRGMv2_3615_10 HRGMv2_3615_10_26 22343 22723 + NusG_II
TC HRGMv2_3615_10 HRGMv2_3615_10_27 22727 23248 + 2.A.87.3.1
pfam HRGMv2_3615_10 HRGMv2_3615_10_28 23238 23921 + RadC | UPF0758_N
TC HRGMv2_3615_10 HRGMv2_3615_10_29 23934 24944 + 1.A.33.1.5
Gene ID: HRGMv2_3615_10_19
Type: CAZyme
Location: 16584 - 17240 (+)
Gene ID: HRGMv2_3615_10_20
Type: TC
Location: 17306 - 18643 (+)
Gene ID: HRGMv2_3615_10_21
Type: TC
Location: 18654 - 19628 (+)
Gene ID: HRGMv2_3615_10_22
Type: pfam
Location: 19621 - 20160 (+)
Gene ID: HRGMv2_3615_10_23
Type: TC
Location: 20169 - 20840 (+)
Gene ID: HRGMv2_3615_10_24
Type: TC
Location: 20850 - 21422 (+)
Gene ID: HRGMv2_3615_10_25
Type: TC
Location: 21432 - 22232 (+)
Gene ID: HRGMv2_3615_10_26
Type: pfam
Location: 22343 - 22723 (+)
Gene ID: HRGMv2_3615_10_27
Type: TC
Location: 22727 - 23248 (+)
Gene ID: HRGMv2_3615_10_28
Type: pfam
Location: 23238 - 23921 (+)
Gene ID: HRGMv2_3615_10_29
Type: TC
Location: 23934 - 24944 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List