Cluster: HRGMv2_3615_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3615
- CGC Family ID: CGCFAM_10405
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3615_7 | HRGMv2_3615_7_39 | 41765 | 42373 | + | AA6 |
| pfam | HRGMv2_3615_7 | HRGMv2_3615_7_40 | 42886 | 43488 | + | VTT_dom |
| pfam | HRGMv2_3615_7 | HRGMv2_3615_7_41 | 43552 | 44142 | + | VTT_dom |
| TC | HRGMv2_3615_7 | HRGMv2_3615_7_42 | 44226 | 44447 | - | 3.A.1.111.3 |
| NULL(UNKNOWN) | HRGMv2_3615_7 | HRGMv2_3615_7_43 | 44496 | 45455 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3615_7 | HRGMv2_3615_7_44 | 45688 | 46314 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3615_7 | HRGMv2_3615_7_45 | 46380 | 48560 | + | 3.A.11.1.1 |
Gene ID: HRGMv2_3615_7_39
Type: CAZyme
Location: 41765 - 42373 (+)
Type: CAZyme
Location: 41765 - 42373 (+)
Gene ID: HRGMv2_3615_7_40
Type: pfam
Location: 42886 - 43488 (+)
Type: pfam
Location: 42886 - 43488 (+)
Gene ID: HRGMv2_3615_7_41
Type: pfam
Location: 43552 - 44142 (+)
Type: pfam
Location: 43552 - 44142 (+)
Gene ID: HRGMv2_3615_7_42
Type: TC
Location: 44226 - 44447 (-)
Type: TC
Location: 44226 - 44447 (-)
Gene ID: HRGMv2_3615_7_43
Type:
Location: 44496 - 45455 (-)
Type:
Location: 44496 - 45455 (-)
Gene ID: HRGMv2_3615_7_44
Type:
Location: 45688 - 46314 (-)
Type:
Location: 45688 - 46314 (-)
Gene ID: HRGMv2_3615_7_45
Type: TC
Location: 46380 - 48560 (+)
Type: TC
Location: 46380 - 48560 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus octavius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.